Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq30 127 2e-24 seq67 105 6e-18 seq17 105 6e-18 >seq30 Length=52135 Score = 127 bits (140), Expect = 2e-24 Identities = 284/425 (67%), Gaps = 11/425 (3%) Strand=Plus/Minus Query 47159 CGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGG 47218 ||| |||||| |||||||||||||| || || |||| || | | || | || Sbjct 33842 CGTAGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGG 33783 Query 47219 AGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACAC 47278 | |||||||| || |||| |||||||| || ||| | ||||| || |||||||| Sbjct 33782 TCTCATGCCCGGTCTGTCGTTCTCGAACGAGCTTATTTCGCGTGACGAGGGTCTGCACAC 33723 Query 47279 CAACTTTGCCTGTCTCTACTACAACA--CT--AGAGTCGATCAAAAGTTGGACGTGCCCA 47334 ||||||| || || | || | || ||| || || | || || Sbjct 33722 TGACTTTGCGTGCCTGCTGTTCAGCCACCTGAAGAAGCGCTC-------GCACCCCGACA 33670 Query 47335 CCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTC 47394 | || | | ||| || | || || || ||||||||| ||| ||||| | || || | Sbjct 33669 CGGTGAACCGCATTATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGTCGGATGCCC 33610 Query 47395 TGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCG 47454 |||||| || | | || ||||| ||| ||||| | ||||||| |||||||| | Sbjct 33609 TGCCCGTCTCGCTCATTGGTATGAATGCGCGCCTGATGTGCCAGTACATTGAATTTGTGG 33550 Query 47455 CCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCG 47514 | ||||||||||| || ||| | || ||| |||||| | ||| || || | Sbjct 33549 CGGACCGCCTGCTGGTGGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTG 33490 Query 47515 AGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCG 47574 | |||||| | || |||||||| | |||||| | |||||||||||| ||||| |||| Sbjct 33489 ACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGAGCGCCGCGTGGGCG 33430 Query 47575 AATAT 47579 | ||| Sbjct 33429 ACTAT 33425 Score = 111 bits (122), Expect = 1e-19 Identities = 423/653 (65%), Gaps = 21/653 (3%) Strand=Plus/Minus Query 146925 GGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAAT 146984 |||||| | |||||||| |||| |||| || || || | ||||||||| ||||| | Sbjct 46849 GGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGAC 46790 Query 146985 CCAAAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAA 147044 ||| | | ||| | || ||| ||||| | || || ||| ||| | || Sbjct 46789 CCACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTCTTGCGCAG 46730 Query 147045 GTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTT 147104 || | | || | | |||| ||||| ||||||| ||| ||| | |||||| Sbjct 46729 GTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGG 46670 Query 147105 TCGCTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGA 147161 ||||| || || || ||||||| ||| || |||| ||||| || || | ||||| Sbjct 46669 GCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGG 46610 Query 147162 CACGAGGCCGC--CGGATTTTGTG-GTGCCGTTG-TAT-------TG-AGCGCTGACGCT 147209 ||| | ||| | || || |||||| ||| || ||| | || | Sbjct 46609 CACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATT 46550 Query 147210 TTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGAC-TCGTGCAAGG 147268 || | | |||| || | ||| ||| || |||||||||| ||| | || || | | Sbjct 46549 ATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTG-AGTG 46491 Query 147269 TCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTT 147328 | | |||||| || ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct 46490 TGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTT 46431 Query 147329 GGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAG 147386 | ||| ||| || || ||||||||||| |||||||| || | | ||| Sbjct 46430 GCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAG 46371 Query 147387 ACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGC 147446 || | | ||| || || ||||| |||||| || ||| ||||||||||| | | || Sbjct 46370 ACATGT-AGTTG-TAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGC 46313 Query 147447 GACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATA 147506 || ||||| ||||||||||| || || || || | | | |||||| | || || Sbjct 46312 CACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTA 46253 Query 147507 TCCATTGGTCAGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559 | | |||||| ||||| || || | ||||||| | |||| | || || Sbjct 46252 TGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGT 46200 >seq67 Length=407448 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | ||| ||||| ||||| || ||||| |||| | ||| || || || Sbjct 70644 CACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 70703 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||| | ||||| || || ||||| || |||||||||||| Sbjct 70704 CAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 70763 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||| | | |||| ||||| | |||||| |||| || | ||| || Sbjct 70764 GATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTT 70823 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 ||| ||||| || || || || || |||||||| Sbjct 70824 GCCAGTCAGGGTCTTGACGAAGATTTGCATGGC 70856 >seq17 Length=189903 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | ||| ||||| || || || ||||| ||| Sbjct 58418 GCACCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 58359 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| ||| || ||||| || || || |||||| ||||| || || ||| Sbjct 58358 CTCAGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGA 58299 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 58298 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 58239 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||| | ||| || || |||| || || || || | |||||| Sbjct 58238 ACCTCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCATG 58188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500389880560