Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq30 93.3 4e-14 seq67 91.5 1e-13 >seq30 Length=52135 Score = 93.3 bits (102), Expect = 4e-14 Identities = 178/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116 ||||| ||||||| | |||| |||||||||||| | || ||||||||||| |||| Sbjct 47448 ACGGCACGTACGAGACATACGAGGGCAGCCCGGCCTCGCAGGGCATTTTGCAGTATGACA 47507 Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGA-GCGTTTTAAAACAACGCATATCG 124175 ||||||| || || | || |||||||||||| | | || | | | || | Sbjct 47508 TGTGGAACCGCACGCCCTCTGATCTGTGGGACTGGACGGCCCTCAAGGCCAAG-ATTGCC 47566 Query 124176 ACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAA 124235 | ||| || |||| || |||||| || | ||| |||||||| || | || ||| Sbjct 47567 AAGCATGGCCTGCGGAATTCGCTGCTGCTTGCGCCGATGCCGACCGCCTCGACAAGTCAG 47626 Query 124236 ATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTG 124295 || | || ||||| | ||| ||||||| ||| | ||| | ||| |||| || ||| Sbjct 47627 ATCCTTGGCTTTAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTG 47686 Query 124296 TTAGCCGGCGATTTTCAAGT 124315 | ||||| || || || || Sbjct 47687 CTCGCCGGTGAGTTCCAGGT 47706 >seq67 Length=407448 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| ||||| || ||||||||||| || || ||||||| || || || Sbjct 70644 CACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 70703 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || || || || ||| | || | || || |||||||| ||||| || || || || || Sbjct 70704 CAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 70763 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | ||||| || |||||||| ||||| || | ||| || Sbjct 70764 GATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTT 70823 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 ||| || || || || || || |||||||| || Sbjct 70824 GCCAGTCAGGGTCTTGACGAAGATTTGCATGGC 70856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002810147240