Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq30 188 9e-43 >seq30 Length=52135 Score = 188 bits (208), Expect = 9e-43 Identities = 904/1415 (64%), Gaps = 29/1415 (2%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 |||||||| ||||| || | || || |||||| ||||||| |||||||||||||| Sbjct 47700 AACTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCG 47641 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 || || | ||| || ||| ||||| || ||||| || || | || || || Sbjct 47640 TTAAAGCCAAGGATCTGACTTGTCGAGGCGGTCGGCATCGGCGCAAGCAGCAGCGAATTC 47581 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTG 116053 || || || | ||| |||||||||| |||||| | | | || | Sbjct 47580 CGCAGGCCATGCTTGGCAATCTTGGCCTTGAGGGCCGTCCAGTCCCACAGATCAGAG--G 47523 Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113 | | | |||||| ||| |||| | || || || || || || ||||| ||| Sbjct 47522 GCGTGCGGTTCCACATGTCATACTGCAAAATGCCCTGCGAGGCCGGGCTGCCCTCGTATG 47463 Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC-CTCGAGGGCTGCGTGATAC 116172 |||| || | ||| | ||| || | ||| | | || ||| || || ||||| || Sbjct 47462 TCTCGTACGTGCCGTACTGCTCAGCGAGCTCGCA-CGAGCGCTCAAGCGCGGCGTGGTAA 47404 Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTG-GCCTCGTCGGAATCAAACGCG-AGAC 116230 || |||||||| || | |||||| || | ||||| | | ||||| | | || | Sbjct 47403 ATCGTCTCAAAGATCTGCACATTCAG-GCGGCGAGCCTCTTGGCTGTCAAAGGGGTAGCC 47345 Query 116231 GGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289 || | ||||| |||| || || || || ||||| | ||||| || || | | | Sbjct 47344 --CATGATCATAAAGGCATCGGCTAGGCCCTGCACACCAATACCAATAGGACGGTTGCGC 47287 Query 116290 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || || || ||| | ||||| ||| | || ||||||||| | || || Sbjct 47286 ATGTTGGAGCGGCGCGCGCTGGGGACGGGGTAATAGTTGATATCGATAATGCGGTTCAGG 47227 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC--AAAACTG--CGAGT 116405 || ||| || ||||| | | ||||| || | | | | | | || | | Sbjct 47226 TTCTTGCACACCACCTTGGACACGTCATGCAGGCGCTGGAAGTTGTACACCTTATCCGGA 47167 Query 116406 CTCTT--CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463 | | | | | || | || | || || || || || |||| || || || | ||||| Sbjct 47166 CCCGTGCCCTCGATAAACGTCGGCAGAGCAATGGAGGCCAAGTTGCATACGGCCGTCTCC 47107 Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523 ||| |||| || ||||| || ||||||| || || ||||| || ||||| | | Sbjct 47106 TCCGGCGAGCTGTATTCCATAATCTCTGTACACAGGTTCGAGCTCTTGATCGTGCCGAGG 47047 Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583 ||||| || || ||| ||| || || ||||| ||||| | || | |||||| Sbjct 47046 TTCTTCTGGTTGCTCTTACGGTTGGCCGAGTCTTTGTACAGCATGAAGGGGTTGCCCGTC 46987 Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642 || | || | | || || | | ||| | | || | | || | || ||| || || Sbjct 46986 TCGATCTGCGCTTCCAGGATCGAGTACCACAGCTTCTGGGCCTTG-ACCGTGCGCTTAGC 46928 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTG 116701 || ||||| |||||||||| ||| || |||||||||||| || | ||| || | Sbjct 46927 ACGTCCCTCGCGCTCGTACTTTTCGTACAGCTGCTCAAACTCTTCGCC-ATAGCAGTCAG 46869 Query 116702 AGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 116761 | || || ||||| | | ||||| | || ||||| | | || |||||| |||| Sbjct 46868 AAAGGCCAGGTGCTTCGGCGGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCT 46809 Query 116762 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 116821 |||| || | ||| |||| ||| | ||| | || || || ||| || | || || | Sbjct 46808 TCATAAACAAGTCGGGGACCCACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTT 46749 Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881 || || || |||| || | ||| || | | ||||| |||||| || ||||||| Sbjct 46748 TGCCGTGGTTCTTGCGCAGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGT 46689 Query 116882 ACACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 | | || | || || ||| ||| | |||| || || | ||||| || Sbjct 46688 AGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGT 46629 Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATA--CG 116996 | |||||||||||||| || | ||||| | | || || || || |||| || Sbjct 46628 TGAATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACG 46569 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 || || | || | || || || |||| || ||||||||| || ||| ||| || || Sbjct 46568 AGCCTG--TAGCACGGATATTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAAT 46511 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 || || | |||| || ||||||| || ||||||||||| |||| | | Sbjct 46510 CATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCAC 46451 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 ||||||||| ||||||||| || | || |||||||||||||| || || || | || Sbjct 46450 GAGGAAGCACGACGACATTTGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGC 46391 Query 117177 GTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTC 117236 ||| | || || ||||| | | ||||||||| | | ||||||||| Sbjct 46390 GTGCGTAAAAGCCTTTTCAGACATGTAGTTGTAGGTCTCAATCGCGCTCTCAATGTCTTC 46331 Query 117237 CCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 ||||||||||| | | || ||||||| ||||| Sbjct 46330 GCCGTGAATACCTACAGCCACACGCATAAGCATGT 46296 Score = 116 bits (128), Expect = 5e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| |||||||||||||| || || || || |||||||| ||||||| Sbjct 33714 GCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAGAACGACAGACCG 33773 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| |||| || ||||| ||||||||||| Sbjct 33774 GGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATG 33833 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTC 127671 ||||| || ||| || || | || ||||| Sbjct 33834 CCCTCTACGGCCGCAAAGGCCACAAGGCGCTC 33865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506670850040