Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq30 347 1e-90 seq67 145 8e-30 seq17 127 2e-24 seq22 95.1 1e-14 seq66 82.4 8e-11 >seq30 Length=52135 Score = 347 bits (384), Expect = 1e-90 Identities = 631/913 (69%), Gaps = 13/913 (1%) Strand=Plus/Plus Query 132609 ATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCAT 132668 ||| |||||||| ||| ||||| || | || || | || ||||| | ||| Sbjct 33425 ATAGTCGCCCACGCGGCGCTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATATTCTCCAT 33484 Query 132669 AAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCT 132728 ||| || |||||||| | | || ||||||||| | || | ||| | || ||||| | Sbjct 33485 AAAGTCAAAGGGGTTCGTCGAGTGGTAGTGCTTCGGGCAGCCCAGCGCCACCAGCAGGCG 33544 Query 132729 GTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCA 132787 ||| ||||| || || ||||| || |||| | |||| || | || | || | Sbjct 33545 GTCCGCCACAAATTCAATGTACTGGCACATCAGGCGCGCA-TTCATACCAATGAGCGAGA 33603 Query 132788 CCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCC 132847 | ||||| || || | | |||| ||||| ||||| || || || || | || Sbjct 33604 CGGGCAGGGCATCCGACAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATAATGCGGT 33663 Query 132848 TAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCG 132906 | || || | || | | || || | | || || |||||| || ||| |||||||| Sbjct 33664 TCAC-CGTGTCGGGGTGCGAGCGCTTCTTCAGGTGGCTGAACAGCAGGCACGCAAAGTCA 33722 Query 132907 CAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGG 132966 |||| |||||||| | ||||| || ||||| ||| | || ||||||||||| Sbjct 33723 GTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAGAACGACAGACCGGGCATGAGA 33782 Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026 || || || |||||||| || || | |||||| |||||| ||||||| |||||| ||| Sbjct 33783 CCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCTACG 33842 Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGC 133086 ||||| || ||||| |||||||| ||||| ||| ||| | ||||||||| ||| Sbjct 33843 GCCGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAGCGAAGC 33902 Query 133087 GCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGT 133146 ||||| |||||||| | || || || ||||| ||||| ||||| ||| | | || Sbjct 33903 GCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTCGATAGCGTTGAAC--AGGAAGG 33960 Query 133147 TTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTA 133204 | || | || ||| | ||| ||||| || ||| ||| ||| | |||||||| | Sbjct 33961 CGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAGCGAGTACGTCTCCGAGTGGA 34020 Query 133205 CGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTT 133264 |||||| || ||| || || ||||||||||| || |||||| | |||| || || Sbjct 34021 TGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGCCTCGGTCGCCTGGACCTC-G 34079 Query 133265 GAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCC 133323 | || ||| ||||| || ||||| ||||| || || || || || |||||||||||| Sbjct 34080 GTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATCCGACGCAGCGAAAAAGGCC 34139 Query 133324 AGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTG 133380 ||||| || | | || || ||||| ||| ||| ||| |||||||| | | Sbjct 34140 AGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCGGTTGTCCCAGTCATTCAGG 34199 Query 133381 TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATA 133440 || || |||||||| | ||||||| ||||||| |||||||||||||| || |||||||| Sbjct 34200 TCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATC 34259 Query 133441 CTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAAC 133500 ||| || || || | || || || | |||||| |||| |||| ||| ||| Sbjct 34260 TGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAAACGGCCAGGGTCTTCCTTCAAA 34319 Query 133501 AGCGGCTCCGCTT 133513 || |||||| ||| Sbjct 34320 AGAGGCTCCTCTT 34332 >seq67 Length=407448 Score = 145 bits (160), Expect = 8e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| | | Sbjct 70853 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 70794 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 70793 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 70734 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | |||||| || |||||||| |||| || || |||| |||||||||| Sbjct 70733 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 70674 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| ||||||| ||| | ||||| || Sbjct 70673 ATCCAAAAGGAGTCGACGCTCCATCTCGTGCTTCG 70639 >seq17 Length=189903 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || | ||||| || || |||||| |||| || ||| | || Sbjct 58189 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 58248 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 58249 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 58308 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || |||||||| || | ||||| || | |||||||||| Sbjct 58309 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 58368 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||||||||| ||||||| || Sbjct 58369 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTTCG 58403 >seq22 Length=111201 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||| ||||| | ||||| | |||||||| | | Sbjct 102391 ATGCAGATTTTTGTCAAAACACTCTCGGGCTCCTCTATCACGCTGGACGTCGAAGAGTCA 102450 Query 38304 GACAGCGTGCAAACGCTTAAAGAA--AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | |||| | | |||||| ||| || || || |||| || ||| |||| Sbjct 102451 GATACCGTGGAT-CATGTAAAGACTCAAATTCAGCGT-AAGCAGGGCATCCCCCCCGATG 102508 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || | | || ||||| ||||| || |||| ||||| || ||||||||| Sbjct 102509 AGCAGCGCCTTCTCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACGCTGAACGACTACC 102568 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | |||||||| ||| ||||||||||| | | |||||| || | || ||| Sbjct 102569 AGATCCAAAAAGAATCGACGCTGCATCTCGAACTGCGTCTGCGTGGTGGC 102618 >seq66 Length=478037 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| || || | || || || |||||||| || | || ||||| | ||||||| Sbjct 478037 CAACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTGAGCGACTAC 477978 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| |||||| |||| |||| | || ||||||||| | || || Sbjct 477977 AACATCCAGAAGGAATCGACATTGCACCTTGTTCTGCGTTTGCGCGGTGG 477928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172368600960