Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq30 181 1e-39 seq36 131 2e-24 seq14 105 8e-17 seq66 87.8 2e-11 >seq30 Length=52135 Score = 181 bits (200), Expect = 1e-39 Identities = 198/261 (76%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 |||||||||||||| ||||||| ||| || ||||| ||||||||||| | ||||| || Sbjct 46653 TGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTT--AC 46596 Query 1630126 T--CGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGC 1630183 | | ||||| ||||| || | || | ||| | || || | || || | | | Sbjct 46595 TGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGAC 46536 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 | || |||||||||| ||| || || | || || ||||| ||||||||||| |||| Sbjct 46535 CAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCT 46476 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 ||||||||||| |||||||| |||||| ||||||||||| ||||||| | || ||| | Sbjct 46475 CGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGCGTAC 46416 Query 1630304 CGGCGTTGAAGAGCGTGGGCG 1630324 | |||||||| |||||||||| Sbjct 46415 CAGCGTTGAACAGCGTGGGCG 46395 Score = 150 bits (166), Expect = 2e-30 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||||||||||| |||||||||||||| | |||||| | ||||| || Sbjct 33417 GCCTTGGCATAGTCGCCCACGCGGCGCTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATA 33476 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || ||||| | || | ||||||||| ||| || |||| | | Sbjct 33477 TTCTCCATAAAGTCAAAGGGGTTCGTCGAGTGGTAGTGCTTCGGGCAGCCCAGCGCCACC 33536 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| || ||||| || |||||||||||||| |||| || ||||| || ||| Sbjct 33537 AGCAGGCGGTCCGCCACAAATTCAATGTACTGGCACATCAGGCGCGCATTCATACCAATG 33596 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 |||| || ||||| | || || ||| || | ||| || | || ||||| Sbjct 33597 AGCGAGACGGGCAGGGCATCCGACAAAAAGTCCTGCTCAATGGCCACAGCCTC 33649 Score = 143 bits (158), Expect = 3e-28 Identities = 207/290 (71%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||| ||||||||| | |||| | | | | Sbjct 34012 CCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGCCTCGGTCGCCT 34071 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| | |||| || | | || |||||| ||| || || || || |||| Sbjct 34072 GGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATCCGACGCAGCGA 34131 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 |||| ||||| || || | | |||||| ||||| |||| | | ||| |||||| Sbjct 34132 AAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCGGTTGTCCCAGT 34191 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 |||| ||||| | ||||||||||||||||| ||| ||||||||||| | Sbjct 34192 CATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCT 34251 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGG 869917 ||||||||| ||| | | |||||||| || |||||||| ||||| ||| Sbjct 34252 TGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAAACGG 34301 Score = 113 bits (124), Expect = 6e-19 Identities = 180/255 (71%), Gaps = 15/255 (6%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || ||||||||||| || |||||||||||||| ||||| | | ||| ||||||||| Sbjct 33768 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAG 33827 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||||||||| ||||| |||||| | | || ||||| | || |||||| | | Sbjct 33828 AAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTCCGAGAA-----CGAGGCAC-GC 33881 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCG 869392 |||| |||||| | |||||| |||||||| ||| |||| || | ||| ||| Sbjct 33882 TTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTCG 33941 Query 869393 ATGGCGCGAAAGAGGTGGTC---CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGG 869449 || ||| || ||| | | || ||| || || || || ||||| |||||| Sbjct 33942 ATAGCGTTGAACAGGAAGGCGCGCTGCTCG---GGCTCGCGGATGTACGTGTCAATCAGG 33998 Query 869450 AGCGAATAGGTCTCC 869464 ||||| || |||||| Sbjct 33999 AGCGAGTACGTCTCC 34013 Score = 93.3 bits (102), Expect = 5e-13 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 1627787 CGTGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACG 1627846 ||||||| | |||||||||||| | || ||||| || || | ||| || | | Sbjct 47411 CGTGGTAAATCGTCTCAAAGATCTGCACATTCAGGCGGCGAGCCTCTTGGCTGTCAAAGG 47352 Query 1627847 GCAGGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGT 1627906 | | |||| || ||| | ||||| ||||||||||| || | || || || |||| Sbjct 47351 GGTAGCCCATGATCATAAAGGCATCGGCTAGGCCCTGCACACCAATACCAATAGGACGGT 47292 Query 1627907 GGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGT 1627966 ||||| ||| ||| |||| || ||| || ||||| | |||||| ||||| | ||||| Sbjct 47291 TGCGCATGTTGGAGCGGCGCGCGCTGGGGACGGGGTAATAGTTGATATCGATAATGCGGT 47232 Query 1627967 TGAGG---TTGCCCACCACGACCTGGACGATCTCGTGCAGG 1628004 | ||| |||| |||||| | ||||| | || |||||| Sbjct 47231 TCAGGTTCTTGCACACCAC--CTTGGAC-ACGTCATGCAGG 47194 >seq36 Length=700595 Score = 131 bits (144), Expect = 2e-24 Identities = 246/358 (69%), Gaps = 4/358 (1%) Strand=Plus/Minus Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960 ||| |||| || || || |||||| | || || |||| || ||| |||||| || Sbjct 605604 GCCGGGCATTGGAAAAACGACGAGCGTGCATTGCCTTGCGCATGCGCTCCTGGGCGATGC 605545 Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020 | | ||||| || ||||| || ||||| || ||||| |||||| | ||||||||||| Sbjct 605544 GTACAAGGAGGCTGTTCTCGAGCTGAACGCCTCAGACGACCGCGGCATTGACGTCGTGCG 605485 Query 1574021 CAAGATCATCAAGCACCACGC-CTCCAAGAGGA-TCGACCTGCCGCCCGGACGCCACAAG 1574078 ||| | |||||| || | || ||| ||| |||||||| || || |||||| Sbjct 605484 CAACAAAATCAAGGCATTTGCGCAGAAAAAGGTGTCG--CTGCCGCCGGGGCGGCACAAG 605427 Query 1574079 GTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCC 1574138 | || | || |||||||| ||| || | ||| | | || |||||||||||||| Sbjct 605426 ATCATTGTGCTGGACGAGGCGGACAGCATGACGCCCGGTGCGCAGCAGGCCCTGCGCCGA 605367 Query 1574139 ACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATG 1574198 || ||||| | | | | ||||||||||| | || || ||| |||| | | Sbjct 605366 ACGATGGAGATTTATGCGCAAACGACGCGCTTCTGTTTTGCATGTAACCAGTCGAACAAG 605307 Query 1574199 GTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACG 1574256 | |||||| | | || ||||| || || |||||||| |||| ||| || |||||| Sbjct 605306 ATTATCGAGCCGATTCAGAGTCGGTGTGCGATTCTGCGGTTTGGACGCGTGAGTGACG 605249 >seq14 Length=1035374 Score = 105 bits (116), Expect = 8e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 1254366 ATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGC 1254425 ||||| ||||| | ||||||||||| |||| ||||||| | |||||| || Sbjct 885543 ATCAGACGCACCGACGTCTGGATCTCACGCGACGAGATCGTGCTCTTCTTGTTGTAGCTG 885484 Query 1254426 GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1254485 || || |||||| | | | ||||| |||| || || | ||||||||||||| Sbjct 885483 GCAAGCTTCGAGGCCTCCGAGGCAATGCGTTCGAAAATATCCTGCACAAACGAGTTCAGA 885424 Query 1254486 ACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAG 1254545 | | ||| | |||||| ||||| ||| ||| |||||||||||||| ||||| |||| Sbjct 885423 ATAGCCATGGCCTTGTTCGAGATACCCGTGTCAGGGTGCACCTGCTTAAGCACACGGTAG 885364 Query 1254546 ATGAACGACGAGTACG 1254561 ||| | | |||||||| Sbjct 885363 ATGTAGGTCGAGTACG 885348 >seq66 Length=478037 Score = 87.8 bits (96), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 19039 GCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGC 19097 ||||||| ||| || |||||||| || ||||| || ||||| ||||| | || Sbjct 249774 GCCAAGAACGACTCTATAGGCGGCACAGTAACGTGTGTTATCCGCAATGTGCCCGTCGGA 249715 Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 || || |||||||| ||||||||||| || || | ||||| |||||| || || Sbjct 249714 CTTGGTGAGCCGTGTTTTGACAAGATGGAATCCAAAATTGCCCAGGCCATGATGAGTATA 249655 Query 19158 CCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 || ||||||||||| | ||||||||| ||| || Sbjct 249654 CCCGCCACCAAGGGTATTGAGATTGGCTCCGGATT 249620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133537536873