Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq30 102 2e-16 >seq30 Length=52135 Score = 102 bits (112), Expect = 2e-16 Identities = 451/703 (64%), Gaps = 21/703 (3%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||| ||| || ||||| ||||| || ||| | || | || || |||||||| || | Sbjct 46221 ACTTTTTCGGATTCAAGACTCTGGAGCGTTCATACCTGCTGCGCATCAATGGCAAGGTGG 46280 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||| || ||||| |||||| || | ||||| || | |||||||| || | || ||| Sbjct 46281 CTGAGCGGCCTCAGCACATGCTTATGCGTGTGGCTGTAGGTATTCACGGCGAAGACATTG 46340 Query 110422 A-AGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT---CATGCTACT 110477 | ||| | ||||| || | | | ||||| ||| || || || | Sbjct 46341 AGAGC-GCGATTGAGACCTACAACTACATGTCTGAAAAG---GCTTTTACGCACGCATCG 46396 Query 110478 CCTACCCTATTTAACGCAGGAACT---AATGGAGGACAATTGGCTTCTTGCTTTCTTCTA 110534 || || || || ||||| || || ||| ||| || | || ||||| || | Sbjct 46397 CCCACGCTGTTCAACGCTGGTACGCCGAATCCG---CAAATGTCGTCGTGCTTCCTCGTG 46453 Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATT 110594 | || || || || || || || ||||| || || | || || |||| | ||| Sbjct 46454 AGCATGAAGGACGACTCGATCGAGGGTATCTACGACACACTCAAGACCTGTGCTATGATT 46513 Query 110595 TCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAAT 110654 || || | | || || |||||| | || ||||| |||| || | | ||| | || Sbjct 46514 TCGAAGACGGCCGGCGGTATTGGTCTGAACATTCATAATATCCGTGCTACAGGCTCGTAT 46573 Query 110655 ATCGCAACAGCGAAGGGTG-CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713 || || |||| |||| | ||| | | |||| || ||| | | || |||||| | Sbjct 46574 ATTGCCGGCACGAACGGTGTCAGTAACGGTA-TTGTGCCCATGCTTCGCGTATTCAACAA 46632 Query 110714 CACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCT 110770 ||| ||| || || | |||||||| || | | ||| ||||||| ||||| || Sbjct 46633 CACGGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGCGCATTTGCCATCTACCT 46692 Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830 || || ||||| || ||| | ||||| || | || || || || || || || || Sbjct 46693 GGAGCCATGGCACTCGGATGTGTTTGAGTTTGTTGACCTGCGCAAGAACCACGGCAAAGA 46752 Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890 || | || ||||| | |||| || ||||| | | || || || ||||| || Sbjct 46753 CGAGGTGCGTGCTCGTGACCTGTTTTTGGCCTTGTGGGTCCCCGACTTGTTTATGAAGCG 46812 Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTG 110949 |||| | | || | ||||| ||||||||||| | || | ||||| || |||| Sbjct 46813 TGTTGAGAAGAACGAAGACTGGTCGCTTATGTGTCC-CGCCGAAGCACCTGGCCTTTCTG 46871 Query 110950 ATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGA 110992 | ||||| |||||||||| | || |||||||| || || Sbjct 46872 ACTGCTATGGCGAAGAGTTTGAGCAGCTGTACGAAAAGTACGA 46914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811750783309