Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq30 246 4e-59 seq36 136 6e-26 seq14 102 1e-15 seq16 87.8 3e-11 >seq30 Length=52135 Score = 246 bits (272), Expect = 4e-59 Identities = 389/545 (71%), Gaps = 22/545 (4%) Strand=Plus/Minus Query 1455742 CCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCG 1455801 ||| ||||| || ||||| || |||||||| ||| ||| | |||||| || ||||||| Sbjct 34301 CCGTTTTGTGCTCTTCCCGATTCGCTACCACGAGATCTGGCAGATGTAC-AAGAAGGCCG 34243 Query 1455802 AGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGACACGGTCCACTGGGTG 1455860 |||| || || ||||||||||||||| | ||||| | || |||| | |||||| Sbjct 34242 AGGCGTCGTTCTGGACCGCCGAGGAGATTGACCT-GTCGAACGACCTGAATGACTGGGAC 34184 Query 1455861 T--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGC 1455917 ||| ||| |||| ||||| || || | | || || || |||||||| ||| || Sbjct 34183 AACCGCATGACGGACGGTGAGCGTCACTTTGTGAGCCATGTGCTGGCCTTTTT-CGCTGC 34125 Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCC 1455977 ||||| || ||| |||||| || | | ||||| | | |||||||| | | Sbjct 34124 GTCGGATGGTATTGTGAACGAGAATCTCGTGGAGCGCTTCAGCACCGAGGTCCAGGCGAC 34065 Query 1455978 AGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 ||||| || | |||||||| ||||||||| || || ||||||||||| || || || Sbjct 34064 CGAGGCTCGCTGCTTTTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACGTA 34005 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG---GACCACCTCTTTCG 1456094 |||||||||||| ||||| ||| || || || |||| || | | ||| || Sbjct 34004 CTCGCTCCTGATTGACACGTACATCCGCGAGCC---CGAGCAGCGCGCCTTCCTGTTCAA 33948 Query 1456095 CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC-- 1456152 ||| ||||| ||| | || |||| ||| |||||||| |||||| | |||||| Sbjct 33947 CGCTATCGAGACGATCCCTGTTGTGAAGAAGAAGGCCGAGTGGGCGCTTCGCTGGATCTC 33888 Query 1456153 -AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGC 1456210 |||| | | |||||| || | ||||| || || | |||||| | ||| |||||| Sbjct 33887 GGACAA-GCGTGCCTCG----TTCTCGGAGCGCCTTGTGGCCTTTGCGGCCGTAGAGGGC 33833 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 ||||| ||||||||| ||| | | ||||| |||||||||||||| || ||||||||| Sbjct 33832 ATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCC 33773 Query 1456271 GGTCT 1456275 ||||| Sbjct 33772 GGTCT 33768 Score = 168 bits (186), Expect = 1e-35 Identities = 195/261 (75%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||||||||| || || || || |||||| ||||| | ||||||||||| || || Sbjct 46395 CGCCCACGCTGTTCAACGCTGGTACGCCGAATCCGCAAATGTCGTCGTGCTTCCTCGTGA 46454 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 |||||||| ||| ||||||||||| ||||| ||||| |||||| || || | || | Sbjct 46455 GCATGAAGGACGACTCGATCGAGGGTATCTACGACACACTCAAGACCTGTGCTATGATTT 46514 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 | ||| |||||||||| || ||| | | || || | || || | ||| | || Sbjct 46515 CGAAGACGGCCGGCGGTATTGGTCTGAACATTCATAATATCCGTGCTACAGGCTCGTATA 46574 Query 260103 TGGCGGGCACCAACG--GCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || ||||| |||| | |||| ||||| ||||||||||||||||||| || ||| | Sbjct 46575 TTGCCGGCACGAACGGTGTCAGT--AACGGTATTGTGCCCATGCTTCGCGTATTCAACAA 46632 Query 260161 CACGGCGCGCTACGTCGACCA 260181 |||||| |||||||||||||| Sbjct 46633 CACGGCACGCTACGTCGACCA 46653 Score = 149 bits (164), Expect = 9e-30 Identities = 158/203 (78%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 ||||| || ||||||| || ||||| || | || ||||||||||||||||||||| | Sbjct 33610 CTGCCCGTCTCGCTCATTGGTATGAATGCGCGC-CTGATGTGCCAGTACATTGAATTT-G 33553 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 | || ||||||||||| | |||||| |||||| ||||||||||| || | ||||| Sbjct 33552 TGGCGGACCGCCTGCTGGTGGCGCTGGGCTGCCC-GAAGCACTACCACTCGACGAACCCC 33494 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 || | |||||| || ||||| | |||||| | |||||||||||||||||||| Sbjct 33493 TTTGACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGAGCGCCGCGTG 33434 Query 1456750 GGCGAGTACGCCAAGGCCGGCGT 1456772 ||||| || ||||||||||| || Sbjct 33433 GGCGACTATGCCAAGGCCGGTGT 33411 >seq36 Length=700595 Score = 136 bits (150), Expect = 6e-26 Identities = 265/389 (68%), Gaps = 2/389 (1%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 ||||| | | ||| |||| ||||| || ||||| || ||||| | | |||||| | | Sbjct 605249 CGTCACTCACGCGTCCAAACCGCAGAATCGCACACCGACTCTGAATCGGCTCGATAATCT 605308 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | |||| ||| || || | || |||||||| | | || | ||||| || Sbjct 605309 TGTTCGACTGGTTACATGCAAAACAGAAGCGCGTCGTTTGCGCATAAATCTCCATCGTTC 605368 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || |||||||| || || | ||||| | || ||| |||||||| || | ||||||| Sbjct 605369 GGCGCAGGGCCTGCTGCGCACCGGGCGTCATGCTGTCCGCCTCGTCCAGCACAATGATCT 605428 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095 |||| ||||| ||||||| ||| ||||| || ||||| | ||||||| Sbjct 605429 TGTGCCGCCCCGGCGGCAGCGACACCTTTTTCTGCGCAAATGCCTTGATTTTGTTGCGCA 605488 Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCG 333155 ||||||| | |||||| ||||| || ||||| || ||||| || ||||| | | || Sbjct 605489 CGACGTCAATGCCGCGGTCGTCTGAGGCGTTCAGCTCGAGAACAGCCTCCTTGTACGCAT 605548 Query 333156 CACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGAC 333215 | |||| ||| | |||| ||||| | |||||| || || || |||| ||| | Sbjct 605549 CGCCCAGGAGCGCATGCGCAAGGCAATGCACGCTCGTCGTTTTTCCAATGCCCGGCATGC 605608 Query 333216 CCGCCAGCAAGAGGT-TGGGCATGTTGCC 333243 | | || | ||||| ||||| |||||| Sbjct 605609 CAGACACGAGGAGGTGCGGGCA-GTTGCC 605636 >seq14 Length=1035374 Score = 102 bits (112), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 724897 CGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCAT 724956 |||||||| ||| |||||| ||||| |||||||||||||| || | | || Sbjct 885348 CGTACTCGACCTACATCTACCGTGTGCTTAAGCAGGTGCACCCTGACACGGGT-----AT 885402 Query 724957 CCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG 725016 | || |||||| ||||| | || ||||||||||||| | || || |||| ||||| | Sbjct 885403 C-TCGAACAAGGCCATGGCTATTCTGAACTCGTTTGTGCAGGATATTTTCGAACGCATTG 885461 Query 725017 GCACCGAGGCCGGTCG--CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGA 725074 | | |||||| ||| || || ||| ||||||| | ||||||| |||| || Sbjct 885462 CCTCGGAGGCC--TCGAAGCTTGCCAGCTACAACAAGAAGAGCACGATCTCGTCGCGTGA 885519 Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGC 725125 ||||||||| | ||||| ||||| | | ||| || || | | |||||| Sbjct 885520 GATCCAGACGTCGGTGCGTCTGATTCTCCCCGGTGAGCTCTCGAAGCACGC 885570 >seq16 Length=193936 Score = 87.8 bits (96), Expect = 3e-11 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| || | |||| ||| |||| ||| |||||||| ||| |||||| || Sbjct 7996 CTCCATCTCGCCGAACCGGATGCCACCCGCACGCTTGCGGCCCTTGACGGGCTGCCGCGT 8055 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGT-CGGGCGTGAATCTTGTCGATGGCCACGTGGCGCA 1600376 ||| |||||||||||| || || ||| | || | ||||||| || ||| ||| || | Sbjct 8056 GAGGGCGTGGACGGGGCCG-GTCGTGCGGACCTGGAACTTGTCGTTGACCATGTGTCGGA 8114 Query 1600377 GGGCCTGGTAGTAGACCGGCGCCG 1600400 || ||||||||| | || ||||| Sbjct 8115 GGCGCTGGTAGTACA-CGACGCCG 8137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804544823178