Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq30 147 3e-30 >seq30 Length=52135 Score = 147 bits (162), Expect = 3e-30 Identities = 364/547 (67%), Gaps = 4/547 (1%) Strand=Plus/Minus Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 || || | |||||| | | ||| || |||||||| || || || || || | | || Sbjct 46731 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 46672 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || || || || || || || | ||| | || ||||| || | || | ||||| Sbjct 46671 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 46612 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 || | |||||| ||| ||| || || || | |||||| ||| | || || ||| Sbjct 46611 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 46552 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAAT 69918 ||| ||| ||||| || || || ||| | || || || | |||||| || | | Sbjct 46551 TTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGT 46492 Query 69919 GTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATT 69978 ||||| || |||||||| || || || ||||| | | || || || |||||| Sbjct 46491 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 46432 Query 69979 TGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCA 70038 || ||| || || || || || | || || |||||||| || || |||||| Sbjct 46431 TGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCA 46372 Query 70039 GAAA-GCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCG 70096 || | | || ||||| || ||||| || || || || | | | ||||| |||| | Sbjct 46371 GACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCG-TGAATACCTACAG 46314 Query 70097 CGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGT 70156 | |||||||| | ||| |||||||| || || || || ||| || || ||||| Sbjct 46313 CCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGT 46254 Query 70157 ATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAA 70216 |||| |||||||| || || || ||| ||||||| ||||| | |||||||||| Sbjct 46253 ATGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATAA 46194 Query 70217 TAACAGA 70223 || |||| Sbjct 46193 TAGCAGA 46187 Score = 123 bits (136), Expect = 3e-23 Identities = 372/571 (65%), Gaps = 10/571 (2%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||| || |||||| || || ||||| || | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || | || || ||||| ||||||||||| |||||||| || || | || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || ||||||||||| ||||| || ||||| || ||||| | ||| | ||| | | Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 39788 TTATGT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTT 39842 | ||| ||||| | ||||| || || |||||||| ||| ||| || || | Sbjct 33881 CT-TGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCT 33939 Query 39843 CTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACA 39902 | ||||| || || || | | || || | || || || || | | Sbjct 33940 CGATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGA 33999 Query 39903 GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTG 39962 | ||| | || || |||||||| |||||| ||||| || |||||||| || | | Sbjct 34000 GCGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAG 34059 Query 39963 CTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 | || || || ||||| | | || | ||| | | ||| || ||||| || |||| Sbjct 34060 CCTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCAT 34119 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA--- 40079 | || || ||||| |||| ||||| | | ||| | ||| || |||| Sbjct 34120 CCGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGC 34179 Query 40080 ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139 || | ||||||||| | || || || | || | || || || ||||| ||||||| Sbjct 34180 GGTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACG 34239 Query 40140 CCTCTGCCTTTTTGTACATGTTCCATATATC 40170 |||| ||||| |||||||| | ||| || || Sbjct 34240 CCTCGGCCTTCTTGTACATCTGCCAGATCTC 34270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908207541160