Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq30 174 2e-38 >seq30 Length=52135 Score = 174 bits (192), Expect = 2e-38 Identities = 529/809 (65%), Gaps = 19/809 (2%) Strand=Plus/Minus Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 |||| || ||||| || || |||| ||| || ||||| || ||||| | |||||| || | Sbjct 47096 TGTATTCCATAATCTCTGTACACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTTCTGGT 47037 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | ||| ||| || || ||||| |||||| | || | |||||||| | || | Sbjct 47036 TGCTCTTACGGTTGGCCGAGTCTTTGTACAGCATGAAGGGGTTGCCCGTCTCGATCTGCG 46977 Query 118873 ACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT 118931 | || || | | ||| | | || | || | || ||| || || || ||||| Sbjct 46976 CTTCCAGGATCGAGTACCACAGCTTCTGGGCCTTG-ACCGTGCGCTTAGCACGTCCCTCG 46918 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 |||||||||| ||| || ||||||||||| || | || || || || ||| Sbjct 46917 CGCTCGTACTTTTCGTACAGCTGCTCAAACTCTTCGCCATAGCAGTCAGAAAGGCCAGGT 46858 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051 || | | || || | || ||||| | | || |||||| |||||||| || | | Sbjct 46857 GCTTCGGCGGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAG 46798 Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 || |||| ||| | ||| | || || || ||| || | || || | || || || Sbjct 46797 TCGGGGACCCACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTC 46738 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 |||| || | ||| || | | ||||| |||||| || |||||||| | || | | Sbjct 46737 TTGCGCAGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAAT 46678 Query 119172 GACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225 | || ||| | | ||| | |||| || || | || ||| ||| ||||| Sbjct 46677 GCGCCGGGGCGCTT--GTTG-CCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACG 46621 Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGC--CATTTGTCCCCCGAATA--CGAGACTT 119281 |||||||| || | ||||| | | || | | || || || |||| |||| || Sbjct 46620 CGAAGCATGGGCACAATACCGTT--ACTGACACCGTTCGTGCCGGCAATATACGAGCCTG 46563 Query 119282 ATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 119341 | || | || || || |||| || ||||||||| || ||| ||| || || || Sbjct 46562 --TAGCACGGATATTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGC 46505 Query 119342 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 119401 || | |||| || ||||||| || ||||||||||| |||| | | |||||| Sbjct 46504 ACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAA 46445 Query 119402 GCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 ||| ||||||||| || | || |||||||||||||| || || || | ||||| | Sbjct 46444 GCACGACGACATTTGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGT 46385 Query 119462 GAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521 || || ||||| | || ||||||||| | || ||||||||| ||||| Sbjct 46384 AAAAGCCTTTTCAGACATGTAGTTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTG 46325 Query 119522 AATACCGATCGAGACCCGCATAAACATGT 119550 |||||| | | || ||||||| ||||| Sbjct 46324 AATACCTACAGCCACACGCATAAGCATGT 46296 Score = 131 bits (144), Expect = 2e-25 Identities = 311/456 (68%), Gaps = 18/456 (4%) Strand=Plus/Plus Query 129721 CTTGCCATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT 129780 |||| ||||||| || || || |||||| ||||| | ||| || | || ||||| Sbjct 33419 CTTGGCATAGTCGCCCACGCGGCGCTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATATT 33478 Query 129781 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGCT---GGCACTCCAATCTGTTT 129837 ||||||||| ||||| |||||| | |||| | |||| |||| ||| | Sbjct 33479 CTCCATAAAGTCAAAGGGGTTCGTCGAGTGGTAG--TGCTTCGGGCAGCCCAG-CGCCAC 33535 Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTT-CTCGGAGTTCATACCGA 129896 || || || |||| || | |||||||||| ||||| | || | |||||||| | Sbjct 33536 CAGCAGGCGGTCCGCCACAAATTCAATGTACTGGCACATCAGGCGCGCA-TTCATACCAA 33594 Query 129897 TGAGGTTACATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGC 129955 |||| | | ||| || || ||| | | || ||| ||||||| ||||||| ||| Sbjct 33595 TGAGCG-AGACGGGCAGGGCATCCGACAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTA 33653 Query 129956 ACGATGGCGTGAATGGTCTCCG--TGCCAGGTCTATTGCGCAAAGTCT-TGAAGAGTTC- 130011 | ||| || | || || | ||| || || | | | || |||| || Sbjct 33654 ATAATGCGGTTCACCGTGTCGGGGTGCGAGCGCTTCTTC---AGGTGGCTGAACAGCAGG 33710 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 |||| |||| || ||| |||||||||||||| || || || || |||||||| |||| Sbjct 33711 CACG-CAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAGAACGACAG 33769 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 ||| ||||||||||| |||||||| | |||||| |||| || ||||| |||||||| Sbjct 33770 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAA 33829 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTC 130167 ||| ||||| || ||| || || | || ||||| Sbjct 33830 GATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC 33865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434666599640