Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq17 158 3e-33 seq67 149 1e-30 seq42 95.1 3e-14 >seq17 Length=189903 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||| || || | ||||| Sbjct 58400 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 58341 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || |||||||| || |||||||| |||||||| Sbjct 58340 TCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 58281 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| || | ||||| || | ||||||||| Sbjct 58280 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 58221 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | |||||||||||| Sbjct 58220 TTACCCGTCAAGGTCTTGACGAACACTTGCAT 58189 >seq67 Length=407448 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| || || || ||||||| ||||| ||| | || | || || Sbjct 70642 AGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCC 70701 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || |||||||| || |||||||| |||||||| Sbjct 70702 TCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 70761 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| || | || || || | |||||||||| Sbjct 70762 TGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTC 70821 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | |||||| Sbjct 70822 TTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 70853 >seq42 Length=2080 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 7510 GAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATT 7569 ||| ||||||| || ||| |||| || | || ||| ||||| | || || ||| Sbjct 1877 GAACTAGCTGCGCCTGGTGTTCAAGGTCTGGGAGGAAATCATCAACTATTTAATGTGATT 1818 Query 7570 ATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGT 7629 ||||| || || || || | ||| | ||||| | || ||||| | | | || || || Sbjct 1817 ATTACAGCTCACGCATTCCTAATGGTATTCTTCCTAGTAATGCCAGCTCTAATGGGTGGA 1758 Query 7630 TTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTT 7689 ||||| || | ||| |||| ||||| | |||||| ||||||||||| ||| | || Sbjct 1757 TTCGGTAACTACTTCACTCCTGTAATGGTAGGTGCTGTAGATATGGCTTTCCCACGACTA 1698 Query 7690 AACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || ||||| || ||||| | ||| | || ||||| Sbjct 1697 AATAACATTAGTTTCTGGCTACTAGCACCTAGCCTAATTCTA 1656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530145727886