Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq30 156 6e-33 >seq30 Length=52135 Score = 156 bits (172), Expect = 6e-33 Identities = 434/663 (65%), Gaps = 2/663 (0%) Strand=Plus/Minus Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATC 78029 || ||||| | |||||||| | | | || ||| || |||||||| | || || | | Sbjct 46848 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 46789 Query 78030 CATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGA 78089 || | || | ||| || || || | | || || || || ||||| || Sbjct 46788 CACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTCTTGCGCAGG 46729 Query 78090 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT 78149 || | |||||| | | ||| || |||||||| || || || || || | | || || Sbjct 46728 TCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGG 46669 Query 78150 CGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGA 78209 || || || || || || || | || | || ||||| || | || | | ||| || Sbjct 46668 CGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGC 46609 Query 78210 ATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTA 78269 | |||||||||| || || || || | |||||| || | || || |||||| Sbjct 46608 ACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTA 46549 Query 78270 CTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTA 78329 |||| | || || || || ||| |||| || || | ||| || || | ||| Sbjct 46548 TGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGTGTG 46489 Query 78330 TCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 78389 |||||||||||||| || ||| ||| ||||| | | || || || |||||||| Sbjct 46488 TCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGC 46429 Query 78390 TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAA 78449 ||| || || || || || | || || ||||| |||||||| |||||||| Sbjct 46428 GGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGAC 46369 Query 78450 A-GTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508 | |||| ||||| || ||||| || || ||||| ||||| ||||| || || Sbjct 46368 ATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCAC 46310 Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568 |||||| | ||| |||||||| | ||| || ||| ||| || || || |||||| Sbjct 46309 ACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGA 46250 Query 78569 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAAC 78628 |||| ||| || || || ||| ||||||| ||||| | |||||||||||| | Sbjct 46249 ACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATAATAGC 46190 Query 78629 AGA 78631 ||| Sbjct 46189 AGA 46187 Score = 136 bits (150), Expect = 5e-27 Identities = 383/587 (65%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||| ||| || ||||| || || | ||| | ||||| || || | ||| Sbjct 33711 CACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAGAACGACAGA 33770 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 |||||||| || ||||| || |||||||| || || | ||||| || || || ||||| Sbjct 33771 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAG 33830 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317 ||||| |||||||||||||| || ||| | ||| | | ||| |||| Sbjct 33831 ATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAG 33890 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || | ||||| || ||||||||||| ||| ||| || || || ||||| || Sbjct 33891 ATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTCGATAGCGTTG 33950 Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437 || || ||| | | | || | ||| || || || | || ||| | Sbjct 33951 AACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAGCGAGTACGTC 34010 Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 || ||||| || || ||||| ||||| || |||||||| || | || || || | Sbjct 34011 TCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGCCTCGGTCGCC 34070 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || ||||| || | || || || | | |||||| || || || ||||| ||||| Sbjct 34071 TGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATCCGACGCAGCG 34130 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAG 48614 ||||| || | ||||| | | ||| | || | |||| | || | |||| Sbjct 34131 AAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCGGTTGTCCCAG 34190 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 ||||| | || || || | || | || || || ||||| || || ||||| || || Sbjct 34191 TCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTC 34250 Query 48675 TTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||||| | ||| || || ||| | || ||||| | ||||| Sbjct 34251 TTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668200848160