Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq45 154 2e-32 >seq45 Length=36469 Score = 154 bits (170), Expect = 2e-32 Identities = 443/674 (66%), Gaps = 12/674 (2%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 |||||||| | |||||| ||| ||| | || || || |||||||| | || || | | Sbjct 16231 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 16172 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 54112 || | || | ||| || || | | | | |||||| || | || ||||| Sbjct 16171 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 16115 Query 54113 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCA 54172 || || | ||| | | | ||| || ||||| || |||| ||| |||| | | || Sbjct 16114 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 16055 Query 54173 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 54232 || || ||||| || || || || | ||| | || ||||| || | || | | ||| Sbjct 16054 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 15995 Query 54233 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 54292 || | |||||| || |||| || || |||| ||||| || | ||||| ||| Sbjct 15994 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 15935 Query 54293 TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 54352 ||| ||| ||||| || || || ||| | || ||||| | || || || | Sbjct 15934 TTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGT 15875 Query 54353 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 54412 || || ||||| ||||| || || ||| ||||| | | || || || |||||| Sbjct 15874 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 15815 Query 54413 TGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 54470 || || || | || || || || || | || || || ||||||||||| |||| Sbjct 15814 TGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTT 15757 Query 54471 CAGAAA-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 54529 |||| | |||| ||||| ||||| || || || || || ||||| ||||| Sbjct 15756 CAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACA 15698 Query 54530 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAG 54589 || |||||||| | |||||||||||| | ||| | | |||| || || ||||| | Sbjct 15697 GCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGG 15638 Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 54649 || || |||| || || || || ||| ||||||| |||||| || ||||||||| Sbjct 15637 TATGAACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATA 15578 Query 54650 ATAACTGAGTTGAG 54663 ||| | |||| ||| Sbjct 15577 ATAGCAGAGTCGAG 15564 Score = 141 bits (156), Expect = 1e-28 Identities = 392/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || || || ||| ||| ||||||||||| | ||| | ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGC- 24303 || ||||| || || ||||| ||||||||||| | ||| | || | | ||| ||| | Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 24304 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 24362 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 24421 || || || || || || | | || | || || ||||||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 24422 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481 |||| | ||||| || ||||| ||||| || || || ||||| || || | ||| Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 |||||| ||| || || | | || || || | | ||| || ||||| || || || Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 24598 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 24599 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720932063200