Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq45 448 5e-121 seq40 140 3e-28 seq83 131 2e-25 seq20 122 9e-23 seq27 84.2 2e-11 >seq45 Length=36469 Score = 448 bits (496), Expect = 5e-121 Identities = 607/832 (73%), Gaps = 13/832 (2%) Strand=Plus/Minus Query 116595 ACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAA 116654 |||| |||| || ||| | ||||| || | |||| || || |||| |||||||| | Sbjct 3693 ACCCTGGCCGTTTTGTGCTCTTCCCGATTCGCTACCACGAGATCTGGCAGATGTACAAGA 3634 Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||||||||||||||||||||||| ||||||| | |||||||| || ||| || |||| Sbjct 3633 AGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATTGACCTGTCGAACGACCTGAATGACT 3574 Query 116715 GGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCG 116771 |||| ||| ||| ||| ||||| || || | | || |||||||||||||||| Sbjct 3573 GGGACAACCGCATGACGGACGGTGAGCGTCACTTTGTGAGCCATGTGCTGGCCTTTTTCG 3514 Query 116772 CCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC-GCTCAGGAGGTGCAG 116830 | || || || || || ||||||||||| || ||||| ||| || | | |||| ||| Sbjct 3513 CTGCGTCGGATGGTATTGTGAACGAGAATCTCGTGGAGCGCTTCAGCACCG-AGGTCCAG 3455 Query 116831 GTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAA 116890 | | ||||||| || ||||| ||||| || |||||| || |||||| | |||||||| Sbjct 3454 GCGACCGAGGCTCGCTGCTTTTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAG 3395 Query 116891 ATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTT-TGTT 116949 | ||||||| ||| || ||||||||| | ||| | ||| || || || | |||| Sbjct 3394 ACGTATTCGCTCCTGATTGACACGTACATCCGCGAGCCCGAGCAGC-GCGCCTTCCTGTT 3336 Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009 |||||||| |||||||| || || || ||||||||||||||||||| |||||||| Sbjct 3335 CAACGCCATTGAGACGATTCCTGTTGTGAAGAAGAAGGCCGAGTGGGCGCTTCGCTGGAT 3276 Query 117010 CGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | | | || || | ||| | ||| |||||||| |||||||| |||||||| |||||| Sbjct 3275 CTCGGACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCGGCCGTAGAGGGCA 3217 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 ||||||| |||||| |||||| | || || ||||||||||| || || |||||||||| Sbjct 3216 TCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCG 3157 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | ||| | ||| |||||||| || || | |||||||||||||| ||||||||| | Sbjct 3156 GTCTGTCGTTCTCGAACGAGCTTATTTCGCGTGACGAGGGTCTGCACACCGACTTTGCGT 3097 Query 117189 GTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGCGCGCGTCAGGGAGATCGTC 117247 | ||||||||| || || | |||| || | | || | || || | || || Sbjct 3096 GCCTGCTGTTCAGCCACCTGAAGAAGCGCTCGCACCCCGACACG-GTGAACCGCATTATC 3038 Query 117248 ACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTG 117307 || || || || ||||| |||||| ||| | | || || ||||| || || | Sbjct 3037 ACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGTCGGATGCCCTGCCCGTCTCGCTCATT 2978 Query 117308 GGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 || | || |||| | ||||| || ||||| || || || || ||| | |||||| | Sbjct 2977 GGTATGAA-TGCGCGCCTGATGTGCCAGTACATTGAATTTGTGGCGGACCGCCTGCTGGT 2919 Query 117367 CGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATG 117418 | ||||| | || | ||||||||| || || | ||||| | ||||||||| Sbjct 2918 GGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTGACTTTATG 2867 >seq40 Length=632444 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || || || || || ||||||||||||||| | || ||||| | Sbjct 154089 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCT 154148 Query 40747 ACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | || |||| |||||| || || | ||||| |||||||| || | || Sbjct 154149 TCGGACACGATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGA 154207 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || || |||| || || || |||||||| || | |||||||| | |||||| Sbjct 154208 CCAACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTA 154267 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | || |||| || || |||| ||| | ||||| Sbjct 154268 CAACATCCAGAAGGAATCGACATTGCACCTTGTTCTGCGTTTGCGTGGCGG 154318 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||||||||||||| | || ||||| | | Sbjct 154320 ATGCAGATTTTCGTCAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCTTCG 154379 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||||| || || | ||||| |||||||| ||| | ||||| Sbjct 154380 GACACGATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 154438 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || || |||||||| || | |||||||| | ||||||||| Sbjct 154439 ACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAA 154498 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || |||| || ||| | || ||| | || || Sbjct 154499 CATCCAGAAGGAATCGACATTGCACCTTGTGCTACGTTTGCGCGGTGG 154546 >seq83 Length=398874 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| | | Sbjct 62525 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 62466 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 62465 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 62406 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| || |||||||| |||| || || |||| |||||||||| Sbjct 62405 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 62346 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| |||||| | ||||| ||||| ||| Sbjct 62345 ATCCAAAAGGAGTCGACGCTCCATCTCGTG 62316 >seq20 Length=159509 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || | ||||| || || |||||| |||| || || | || Sbjct 51183 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 51242 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 51243 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 51302 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || |||||||| || | ||||| || | |||||||||| Sbjct 51303 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 51362 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | |||||||| || ||| | ||| || | || || Sbjct 51363 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTTCGCCTGCGTGGTGG 51409 >seq27 Length=111450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||| ||||| | ||||| | |||||||||| | Sbjct 8883 ATGCAGATTTTTGTCAAAACACTCTCGGGCTCCTCTATCACGCTGGACGTCGAAGAGTCA 8824 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | |||| | | |||| |||| | || ||||||||||| | || || Sbjct 8823 GATACCGTGGATCATGTAAAGGCTCAAATCCAGCGTAAGCAGGGCATCCCCCCCGATGAG 8764 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || ||| || ||||| ||||| || |||| ||||| || | ||||||| | Sbjct 8763 CAGCGCCTTCTCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACGCTGAGCGACTACCAG 8704 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||| || || | ||||||||||| | |||| || | || |||| Sbjct 8703 ATCCAAAAAGAATCGACGCTGCATCTCGAACTGCGTCTGCGTGGTGGCG 8655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218620378400