Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq40 125 6e-24 seq83 114 1e-20 seq20 105 6e-18 seq45 84.2 2e-11 >seq40 Length=632444 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || || | || || | ||| | ||| || || || || |||||||| |||| Sbjct 154320 TACCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGC 154261 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| ||||| |||||| ||||| || ||||| |||| || ||||| || || |||| Sbjct 154260 TCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAG 154201 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | || | ||||||| ||||| Sbjct 154200 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGA 154141 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | |||||||| ||||| || || ||||| |||||||| Sbjct 154140 CTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| || | | ||| | ||| | ||| || || || || |||||||| |||||| Sbjct 154546 CCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154487 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| |||||| ||||| || ||||| |||| || ||||| || || || || Sbjct 154486 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGA 154427 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | || | ||||||| |||||| Sbjct 154426 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154367 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | |||||||| ||||| || || || ||||||||||| Sbjct 154366 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| ||||| |||||||| ||||| | || || ||||| ||||| Sbjct 62323 TGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGC 62382 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| |||| |||||||| || || ||||| || ||||||||||| || || Sbjct 62383 TTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 62442 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| ||||| | ||||||||||| || | ||| ||||| ||| Sbjct 62443 GCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTC 62502 Query 118716 AGAGTTTTTACAAAAATCTGCATGGC 118741 || || || || || || |||||||| Sbjct 62503 AGGGTCTTGACGAAGATTTGCATGGC 62528 >seq20 Length=159509 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| ||||||| ||||| |||||| Sbjct 51392 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 51333 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| |||||||| || || ||||| || ||||||||||| Sbjct 51332 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 51273 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| ||| | ||| || Sbjct 51272 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 51213 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || |||| || || || || | |||||| Sbjct 51212 ACCCGTCAAGGTCTTGACGAACACTTGCATG 51182 >seq45 Length=36469 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471 || || | ||| || || |||| ||||||||| ||||| ||||| ||||| || Sbjct 15877 AGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGAC 15818 Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529 ||||| || ||||||| || ||||| || || ||||||||||| | | Sbjct 15817 ATTTGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTT 15758 Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589 ||||| || | | || || ||||| |||||| || ||| ||||||||||| | | Sbjct 15757 TCAGAC--ATGTAGTTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTA 15700 Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTC 134623 ||| || ||||| |||||||| || || | ||| Sbjct 15699 CAGCCACACGCATAAGCATGTGCTGAGGCCGCTC 15666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829924142280