Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq40 118 1e-21 seq83 104 3e-17 seq20 86.0 7e-12 >seq40 Length=632444 Score = 118 bits (130), Expect = 1e-21 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||||| || | |||||||| ||||| || || ||||| || ||| || || Sbjct 154309 AAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 154250 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || |||||||||||||| || || || ||||| ||||| | || | || |||| Sbjct 154249 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCC 154190 Query 43086 TTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGT 43144 |||||| ||| || |||| ||| | || |||||| || || || || | || Sbjct 154189 TTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGT 154131 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||||||||||| || || ||||| |||||||| |||||||| Sbjct 154130 GATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 154089 Score = 113 bits (124), Expect = 5e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 |||||||| || | ||||| | ||| | |||||||| ||||| || || ||||| Sbjct 154552 TATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAG 154493 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || ||| || || | || || |||||||||||||| || || || ||||| ||||| Sbjct 154492 TCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCA 154433 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGA 43129 | || | || |||||||||| ||| || |||| ||| | || |||||| || Sbjct 154432 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGA 154374 Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | |||||||||||||| || || ||||| || || || ||||| Sbjct 154373 CTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || || || || |||| || ||||||||||| ||||| Sbjct 62334 CTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGCTTACCCGCGAA 62393 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||| ||||| | || | | |||||||||| ||| || || | | Sbjct 62394 GATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 62453 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||| || || |||| |||||| || ||||| || || ||||| || Sbjct 62454 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGAC 62513 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 62514 GAAGATTTGCAT 62525 >seq20 Length=159509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || ||| || || | || || Sbjct 51392 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 51333 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||||||||| || || || || ||||| ||||| | || | | |||||||||| Sbjct 51332 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 51273 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | || | | ||||||| || ||||| |||| ||||| || || Sbjct 51272 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 51213 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| | ||||| || || | |||||| Sbjct 51212 ACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816956705200