Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11]
90 sequences; 7,249,850 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq40 118 1e-21
seq83 104 3e-17
seq20 86.0 7e-12
>seq40
Length=632444
Score = 118 bits (130), Expect = 1e-21
Identities = 161/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025
||||||| || | |||||||| ||||| || || ||||| || ||| || ||
Sbjct 154309 AAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 154250
Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085
| || || |||||||||||||| || || || ||||| ||||| | || | || ||||
Sbjct 154249 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCC 154190
Query 43086 TTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGT 43144
|||||| ||| || |||| ||| | || |||||| || || || || | ||
Sbjct 154189 TTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGT 154131
Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|||||||||||| || || ||||| |||||||| ||||||||
Sbjct 154130 GATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 154089
Score = 113 bits (124), Expect = 5e-20
Identities = 167/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
|||||||| || | ||||| | ||| | |||||||| ||||| || || |||||
Sbjct 154552 TATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAG 154493
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| ||| || || | || || |||||||||||||| || || || ||||| |||||
Sbjct 154492 TCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCA 154433
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGA 43129
| || | || |||||||||| ||| || |||| ||| | || |||||| ||
Sbjct 154432 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGA 154374
Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || | |||||||||||||| || || ||||| || || || |||||
Sbjct 154373 CTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320
>seq83
Length=398874
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || || || || |||| || ||||||||||| |||||
Sbjct 62334 CTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGCTTACCCGCGAA 62393
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||| ||||| | || | | |||||||||| ||| || || | |
Sbjct 62394 GATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 62453
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| ||| || || |||| |||||| || ||||| || || ||||| ||
Sbjct 62454 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGAC 62513
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 62514 GAAGATTTGCAT 62525
>seq20
Length=159509
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
||||| |||| || |||||| || || ||||| || ||| || || | || ||
Sbjct 51392 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 51333
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||||||||| || || || || ||||| ||||| | || | | ||||||||||
Sbjct 51332 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 51273
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||| || || | || | | ||||||| || ||||| |||| ||||| || ||
Sbjct 51272 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 51213
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| | ||||| || || | ||||||
Sbjct 51212 ACCCGTCAAGGTCTTGACGAACACTTGCAT 51183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816956705200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |