Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq40 122 6e-23 seq83 102 5e-17 >seq40 Length=632444 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| |||| | ||| || ||||| || || ||| ||||| |||||||||||| | Sbjct 154318 CCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154259 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || || || || || ||||| ||||| || Sbjct 154258 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGA 154199 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 154198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154139 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||||| || || || ||||||||||||||||| Sbjct 154138 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| ||||||| | ||||| ||||| || || ||| ||||| |||||||||||| Sbjct 154547 TCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCT 154488 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| | || |||| |||||| || || || || || ||||| ||||| ||| Sbjct 154487 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGG 154428 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 154427 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 154368 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||||| || || || || || || |||||||| Sbjct 154367 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || |||||||||||| ||| |||| |||| |||| |||||| || ||||| Sbjct 62335 TCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAG 62394 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| ||||| || | | ||||||||| ||||| ||| | || | Sbjct 62395 ATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTG 62454 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | ||| ||||| || | |||||| || ||||| || || || || || Sbjct 62455 TCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGACG 62514 Query 34379 AAGATCTGCATCGC 34392 ||||| ||||| || Sbjct 62515 AAGATTTGCATGGC 62528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071645630400