Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq20 136 3e-27 seq40 114 1e-20 seq83 107 2e-18 >seq20 Length=159509 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| |||||||||||| |||| ||| | || ||| Sbjct 51391 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCC 51332 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | ||||||||||||| Sbjct 51331 AGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 51272 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| |||||||| Sbjct 51271 ATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 51212 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||||| ||||| || || | ||||||| || Sbjct 51211 CCCGTCAAGGTCTTGACGAACACTTGCATGATG 51179 >seq40 Length=632444 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| |||| ||| | || ||||| || || || || || Sbjct 154282 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 154223 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||||||||| ||||| | |||||||||||| || || ||| | || Sbjct 154222 ATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 154164 Query 45266 GCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | || | ||||| | ||| || || | ||| || || ||||| ||||| |||||||| Sbjct 154163 GTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCAC 154104 Query 45325 AAAGATTTGCATGTT 45339 |||||| ||||| || Sbjct 154103 AAAGATCTGCATTTT 154089 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | || || | ||||| || |||||||| |||||||||||| || Sbjct 154546 CCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154487 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| || || || || || |||| ||||||||||| || || Sbjct 154486 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGA 154427 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCAC 45288 | |||||||||||| || || ||| | || | || | ||||| | ||| || Sbjct 154426 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGAC 154368 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || || ||||| ||||| ||||| || || || ||||| Sbjct 154367 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| |||||| || |||||||||||| | || || |||| ||||| || Sbjct 62323 TGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGC 62382 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || ||||| || | ||||||||||| ||||| | ||||||||||||| || || Sbjct 62383 TTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 62442 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | |||| ||| ||||| | || ||||||||||| ||| Sbjct 62443 GCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTC 62502 Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || |||||||||||| Sbjct 62503 AGGGTCTTGACGAAGATTTGCATG 62526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074766651890