Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11]
90 sequences; 7,249,850 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq45 168 8e-37
>seq45
Length=36469
Score = 168 bits (186), Expect = 8e-37
Identities = 398/597 (67%), Gaps = 8/597 (1%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || || || ||| ||||||||||||||| | ||| | ||||| ||
Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|||| || |||||||| || |||||||| || ||||| || || || ||||| || ||
Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750
|| |||||||| || ||||| || |||||||| | ||| | ||| | | ||| ||| |
Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265
Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808
|||| ||||| | ||||| ||||||||||| || ||| ||| ||||| ||
Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325
Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868
||||| || || || || | | || | || || || |||| ||
Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385
Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928
|||| | ||||| || ||||| ||||| ||||| || ||||| || || | |||
Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445
Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988
|||||| ||| || || || | || || || | | ||| || ||||| || |||||
Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505
Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 34045
|| || ||||| |||| ||||| | | ||| | | |||| | | |
Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565
Query 34046 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105
|| | ||| ||||| | || || || | || | || || | ||||| || || ||
Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625
Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||| ||||| || ||||| | |||||| || || || | || ||||| | |||||
Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682
Score = 161 bits (178), Expect = 1e-34
Identities = 636/990 (64%), Gaps = 14/990 (1%)
Strand=Plus/Minus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
|||||||| | |||||| ||| ||| | || || || |||||||| | || || | |
Sbjct 16231 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 16172
Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 63350
|| | || | ||| || || | | | | |||||| || | || |||||
Sbjct 16171 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 16115
Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410
|| || | ||| | | | ||| || ||||| || |||| ||| ||||| | | ||
Sbjct 16114 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 16055
Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470
|| || ||||| || || || || | ||| | || ||||| || | || | | |||
Sbjct 16054 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 15995
Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530
|| | ||||||||| | ||| || || |||| ||||| || | ||||| |||
Sbjct 15994 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 15935
Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590
||| ||| ||||| || || || ||| | || ||||| | || || || |
Sbjct 15934 TTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGT 15875
Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650
||||| ||||| || || || || || ||||| | | || || || ||||||
Sbjct 15874 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 15815
Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710
|| || | || || || || || | || || || ||||||||||| ||||||
Sbjct 15814 TGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCA 15755
Query 63711 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63769
|| | |||| ||||| |||||||| || || || || ||||| ||||| ||
Sbjct 15754 GACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGC 15696
Query 63770 GACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTA 63829
|||||||| | |||||||||||| | ||| | | ||| || || || || |||
Sbjct 15695 CACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTA 15636
Query 63830 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889
|| |||| || || || || ||| ||||||| |||||| || |||||||||||
Sbjct 15635 TGAACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAAT 15576
Query 63890 AACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATA 63947
| | || | |||| || | || | || | | | || ||| |||||
Sbjct 15575 AGCAGAGTCGAGCACGTCGCGGTGCTTCATTACGGTGTGGAACGT--CTCTTCAGAAATC 15518
Query 63948 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 64007
|| | || || || | || || || ||||||| | | ||||| || || |
Sbjct 15517 ATAGAGCTGTGCTTGCCCGTCTTCGGGTTCACATAGTCGTGCAGATCCTGAATGACCTGG 15458
Query 64008 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATG 64067
||||| || || || |||||||| || || ||||| || | || || || | |
Sbjct 15457 CTAAAGCCCTTCTTCGTCTCCTTGTGCAGGTTGCTGATGGCGATACGCGCAGCCAGCACG 15398
Query 64068 GCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAA 64126
|| || || |||||| || || | || ||| || | || || || || ||||||
Sbjct 15397 GCGTAGTCGGGATGTGTCGTGGT-CTTGTAGGCAGCCGTCTCAGCAGCTAGGTTGTCCAG 15339
Query 64127 TTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGG 64186
|| ||||| || ||||| | || || || | ||| ||||| || |||| || ||
Sbjct 15338 CTCGACCGTGGTAACTCCTTCGTAGATACCGTCAATTACCTTGCGAGTGATTTCGATGGG 15279
Query 64187 ATCTATATGATCCGTGTTTAAGCCATAGCA 64216
||| || | | | ||| | |||||||||
Sbjct 15278 ATCAATGTAGTTCATGTCAAGGCCATAGCA 15249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816891455200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |