Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq45 168 8e-37 >seq45 Length=36469 Score = 168 bits (186), Expect = 8e-37 Identities = 398/597 (67%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || || || ||| ||||||||||||||| | ||| | ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 |||| || |||||||| || |||||||| || ||||| || || || ||||| || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750 || |||||||| || ||||| || |||||||| | ||| | ||| | | ||| ||| | Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868 ||||| || || || || | | || | || || || |||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928 |||| | ||||| || ||||| ||||| ||||| || ||||| || || | ||| Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988 |||||| ||| || || || | || || || | | ||| || ||||| || ||||| Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 34045 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 34046 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||| ||||| || ||||| | |||||| || || || | || ||||| | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Score = 161 bits (178), Expect = 1e-34 Identities = 636/990 (64%), Gaps = 14/990 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 |||||||| | |||||| ||| ||| | || || || |||||||| | || || | | Sbjct 16231 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 16172 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 63350 || | || | ||| || || | | | | |||||| || | || ||||| Sbjct 16171 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 16115 Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410 || || | ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 16114 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 16055 Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470 || || ||||| || || || || | ||| | || ||||| || | || | | ||| Sbjct 16054 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 15995 Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530 || | ||||||||| | ||| || || |||| ||||| || | ||||| ||| Sbjct 15994 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 15935 Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590 ||| ||| ||||| || || || ||| | || ||||| | || || || | Sbjct 15934 TTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGT 15875 Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650 ||||| ||||| || || || || || ||||| | | || || || |||||| Sbjct 15874 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 15815 Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710 || || | || || || || || | || || || ||||||||||| |||||| Sbjct 15814 TGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCA 15755 Query 63711 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63769 || | |||| ||||| |||||||| || || || || ||||| ||||| || Sbjct 15754 GACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGC 15696 Query 63770 GACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTA 63829 |||||||| | |||||||||||| | ||| | | ||| || || || || ||| Sbjct 15695 CACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTA 15636 Query 63830 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 || |||| || || || || ||| ||||||| |||||| || ||||||||||| Sbjct 15635 TGAACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAAT 15576 Query 63890 AACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATA 63947 | | || | |||| || | || | || | | | || ||| ||||| Sbjct 15575 AGCAGAGTCGAGCACGTCGCGGTGCTTCATTACGGTGTGGAACGT--CTCTTCAGAAATC 15518 Query 63948 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 64007 || | || || || | || || || ||||||| | | ||||| || || | Sbjct 15517 ATAGAGCTGTGCTTGCCCGTCTTCGGGTTCACATAGTCGTGCAGATCCTGAATGACCTGG 15458 Query 64008 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATG 64067 ||||| || || || |||||||| || || ||||| || | || || || | | Sbjct 15457 CTAAAGCCCTTCTTCGTCTCCTTGTGCAGGTTGCTGATGGCGATACGCGCAGCCAGCACG 15398 Query 64068 GCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAA 64126 || || || |||||| || || | || ||| || | || || || || |||||| Sbjct 15397 GCGTAGTCGGGATGTGTCGTGGT-CTTGTAGGCAGCCGTCTCAGCAGCTAGGTTGTCCAG 15339 Query 64127 TTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGG 64186 || ||||| || ||||| | || || || | ||| ||||| || |||| || || Sbjct 15338 CTCGACCGTGGTAACTCCTTCGTAGATACCGTCAATTACCTTGCGAGTGATTTCGATGGG 15279 Query 64187 ATCTATATGATCCGTGTTTAAGCCATAGCA 64216 ||| || | | | ||| | ||||||||| Sbjct 15278 ATCAATGTAGTTCATGTCAAGGCCATAGCA 15249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816891455200