Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq45 150 2e-31 >seq45 Length=36469 Score = 150 bits (166), Expect = 2e-31 Identities = 394/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || || || ||| ||| ||||||||||| | ||| | ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 36326 || ||||| || || ||||| ||||||||||| | ||| | ||| | | ||| ||||| Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 36327 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 || || || || || || | | || | || || ||||||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 |||| | ||||| || ||||| ||||| || || || ||||| || || | ||| Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564 |||||| ||| || || || | || || || | | ||| || ||||| || || || Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 36565 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTTTGGTGTTAG 36621 || || ||||| |||| ||||| | | ||| | | ||| | | | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 36622 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 36681 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 36682 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Score = 145 bits (160), Expect = 1e-29 Identities = 351/527 (67%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || |||| ||| ||||| | | || || || ||||| || || || || | | Sbjct 16087 TGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACG 16028 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | || ||||| || | || | | ||| || | |||||| || ||| || Sbjct 16027 TAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTC 15968 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 || |||| ||||| || | ||||| |||||| ||| ||||| || || || Sbjct 15967 GTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGACCAATGCCGCCG 15908 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 ||| | || ||||| | || || || | || || ||||| ||||| || || Sbjct 15907 GCCGTCTTTGAGATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCG 15848 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAA 66468 ||| ||||| | | || || || |||||||| || || | || || || || | Sbjct 15847 TCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGC--GTACCAGCGTTGA 15790 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATA 66527 | | || || || ||||||||||| |||||||| | |||| ||||| |||||||| Sbjct 15789 ACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGTCTCAATC 15731 Query 66528 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 || || || || ||||| ||||| || |||||||| | |||||||||||| Sbjct 15730 GCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTGCTGAGGC 15671 Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647 | ||| | | |||| || || || || ||| || |||| || || || || Sbjct 15670 CGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGAACGCTCCAGGGTCTTGAATCCG 15611 Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||| ||||||| |||||| || |||||||||||| | |||| ||| Sbjct 15610 AAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 15564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172059555600