Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11]
90 sequences; 7,249,850 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq45 165 1e-35
>seq45
Length=36469
Score = 165 bits (182), Expect = 1e-35
Identities = 397/597 (66%), Gaps = 8/597 (1%)
Strand=Plus/Plus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || || || || ||| |||||||||||| || | ||| | ||||| ||
Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|||| || |||||||| || |||||||| || ||||| || || || || || || ||
Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 42233
|| |||||||| || ||||| ||||||||||| | ||| | ||| | | ||| |||||
Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265
Query 42234 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291
|||| ||||| | ||||| ||||||||||| || ||| ||| ||||| ||
Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325
Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351
||||| || || || || | | || | || || || |||| ||
Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385
Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411
|||| | || || || ||||| ||||| ||||| || ||||| || || | ||
Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445
Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471
|||||| |||| || || || | || || || | | ||| |||||||| || || ||
Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505
Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCCGGTGTTAA 42528
|| || ||||| |||| ||||| | | ||| | | |||||| |
Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565
Query 42529 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588
|| | ||| ||||| | || || || | || | || || | ||||| || || ||
Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625
Query 42589 TTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|| ||||| || ||||| | |||||| || || || |||| ||||| | |||||
Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682
Score = 143 bits (158), Expect = 4e-29
Identities = 355/534 (66%), Gaps = 6/534 (1%)
Strand=Plus/Minus
Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185
||| || ||||| || |||| ||| ||||| | | || || || ||||| || || ||
Sbjct 16094 ATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTG 16035
Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245
|| | ||| | || ||||| || | || | | ||| || | |||||| || |
Sbjct 16034 GTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTTACTGAC 15975
Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTAT 72305
||| || || |||| ||||| || | ||||| ||||| ||| ||||| ||
Sbjct 15974 ACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGACCAAT 15915
Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 72365
|| || ||| | || ||||| | || || || | || || ||||| ||||| ||
Sbjct 15914 GCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGAT 15855
Query 72366 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCC 72423
|| ||| ||||| | | || || || |||||||| || || | || ||
Sbjct 15854 CGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGC--GTACCA 15797
Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGT 72482
|| || || | || || || ||||||||||| |||||||||| |||| ||||| ||
Sbjct 15796 GCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGT 15738
Query 72483 CTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542
|||||| || || || || || || ||||| || |||||||| | ||| ||
Sbjct 15737 CTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTG 15678
Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602
|||||| | ||| | | |||| ||| || || || ||| || |||| || ||
Sbjct 15677 CTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGAACGCTCCAGGGTCTT 15618
Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656
|| || ||| ||||||| |||||| || |||||||||||| | || | |||
Sbjct 15617 GAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 15564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138444968400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |