Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq45 165 1e-35 >seq45 Length=36469 Score = 165 bits (182), Expect = 1e-35 Identities = 397/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || || || ||| |||||||||||| || | ||| | ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 42233 || |||||||| || ||||| ||||||||||| | ||| | ||| | | ||| ||||| Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 42234 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 ||||| || || || || | | || | || || || |||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 |||| | || || || ||||| ||||| ||||| || ||||| || || | || Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 |||||| |||| || || || | || || || | | ||| |||||||| || || || Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCCGGTGTTAA 42528 || || ||||| |||| ||||| | | ||| | | |||||| | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 42529 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 42589 TTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| || ||||| | |||||| || || || |||| ||||| | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Score = 143 bits (158), Expect = 4e-29 Identities = 355/534 (66%), Gaps = 6/534 (1%) Strand=Plus/Minus Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 ||| || ||||| || |||| ||| ||||| | | || || || ||||| || || || Sbjct 16094 ATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTG 16035 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 || | ||| | || ||||| || | || | | ||| || | |||||| || | Sbjct 16034 GTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTTACTGAC 15975 Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTAT 72305 ||| || || |||| ||||| || | ||||| ||||| ||| ||||| || Sbjct 15974 ACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGACCAAT 15915 Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 72365 || || ||| | || ||||| | || || || | || || ||||| ||||| || Sbjct 15914 GCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGAT 15855 Query 72366 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCC 72423 || ||| ||||| | | || || || |||||||| || || | || || Sbjct 15854 CGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGC--GTACCA 15797 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGT 72482 || || || | || || || ||||||||||| |||||||||| |||| ||||| || Sbjct 15796 GCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGT 15738 Query 72483 CTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542 |||||| || || || || || || ||||| || |||||||| | ||| || Sbjct 15737 CTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTG 15678 Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602 |||||| | ||| | | |||| ||| || || || ||| || |||| || || Sbjct 15677 CTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGAACGCTCCAGGGTCTT 15618 Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 || || ||| ||||||| |||||| || |||||||||||| | || | ||| Sbjct 15617 GAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 15564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138444968400