Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq45 246 4e-60 >seq45 Length=36469 Score = 246 bits (272), Expect = 4e-60 Identities = 570/850 (67%), Gaps = 23/850 (3%) Strand=Plus/Minus Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069 || || || || ||| | |||||||| ||||| |||| || || ||||| | ||| ||| Sbjct 3661 TACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAG 3602 Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129 | || ||||| || |||||| | || ||||| | || |||| || |||||| | Sbjct 3601 ATTGACCTGTCGAACGACCTGAATGACTGGGACAACCGCATGACGGACGGTGAGCGTCAC 3542 Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 ||| | || | ||||||| || || | || ||||| || || ||||| ||||| Sbjct 3541 TTTGTGAGCCATGTGCTGGCCTTTTTCGCTGCGTCGGATGGTATTGTGAACGAGAATCTC 3482 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG-TGCTTTTACGGATTC 125246 || || ||| ||| | ||| | | |||| ||| ||||||||||| ||| Sbjct 3481 GTGGAGCGCTTCAGCACCGAGGT--CCAGGCGACCGAGGC-TCGCTGCTTTTACGGTTTC 3425 Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306 || ||||||||||||||| | |||||||| | ||| || |||||||||| |||||| Sbjct 3424 CAGATCATGATTGAGAACATCCACTCGGAGACGTATTCGCTCCTGATTGACACGTACATC 3365 Query 125307 CGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATA 125363 ||||| || ||| || | | || || ||||| || || ||| | || | | Sbjct 3364 CGCGAGCCCGAGCAGCGCGC---CTTCCTGTTCAACGCCATTGAGACGATTCCTGTTGTG 3308 Query 125364 CGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGAC 125423 || ||||| | |||| | |||| |||||| ||| | | |||| | | || Sbjct 3307 AAGAAGAAGGCCGAGTGGGCGCTTCGCTGGATCTCGGACAAGCGTGCCTCGTTCTCGGAG 3248 Query 125424 AGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATC 125483 | || ||||| || || |||||||||||||||||||| ||||| || || | ||| Sbjct 3247 CGCCTTGTGGCCTTTGCGGCCGTAGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATC 3188 Query 125484 TTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCT 125543 || |||||||||||||| || ||||||||||| ||| || | |||||| |||| || Sbjct 3187 TTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGTCGTTCTCGAACGAGCTTATTTCG 3128 Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCC 125603 || |||||||| || ||| |||||||| || ||||| || | | ||| Sbjct 3127 CGTGACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTGTT---CAGCCACCTG------ 3077 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || | || | || | ||| | | |||| | || || || ||| || || Sbjct 3076 AAGAAGCGCTCGCACCCCGACACGGTGAACCGCATTATCACGGAGGCTGTGGCCATTGAG 3017 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAAT 125722 || || ||| | | || |||| || ||| | ||||| ||||| ||| | || || Sbjct 3016 CAGGACTTTTTGTCGGATGCCCTGCCCGTCTCGCTCATTGGTATGAA-TGCGCGCCTGAT 2958 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGAT 125782 |||| ||||||| || |||||||| || || || ||| | | || ||| ||| Sbjct 2957 GTGCCAGTACATTGAATTTGTGGCGGACCGCCTGCTGGTGGCGCTGGGCTGCCCGAAGCA 2898 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 ||| || | | ||| |||||||| || ||| | || || || | || ||| | || Sbjct 2897 CTACCACTCGACGAACCCCTTTGACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAA 2838 Query 125843 CTTTTTCGAG 125852 |||||||||| Sbjct 2837 CTTTTTCGAG 2828 Score = 163 bits (180), Expect = 4e-35 Identities = 358/529 (68%), Gaps = 12/529 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| ||||| || || ||||| || || || ||||| | ||| ||||| |||| | Sbjct 16021 CACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGCGCATTTGCCATCTACCTGGAGC 16080 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||| |||| || ||||| ||| | || ||||||| ||| ||| || |||| Sbjct 16081 CATGGCACTCGGATGTGTTTGAGTTTGTTGACCTGCGCAAGAACCACGGCAAAGACGAGG 16140 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040 || || | ||| |||||| || | ||||| || || ||||| |||||||| || Sbjct 16141 TGCGTGCTCGTGACCTGTTTTTGGCCTTGTGGGTCCCCGACTTGTTTATGAAGCGTGTTG 16200 Query 97041 --AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATT 97098 || ||| | ||||| || ||||| |||| | |||| || || || || | Sbjct 16201 AGAAGAACGAAG---ACTGGTCGCTTATGTGTCCCGCCGAAGCACCTGGCCTTTCTGACT 16257 Query 97099 GCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC--GATACGT 97156 ||| ||||||||||||||| |||| ||||||| ||||| | | || | Sbjct 16258 GCTATGGCGAAGAGTTTGAGCAGCTGTACGAAAAGTACGAGCGCGAGGGACGTGCTAAGC 16317 Query 97157 GAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTG 97215 | ||| ||| | || | |||| |||||| | | ||| || || ||| | ||||| | Sbjct 16318 G-CACG-GTCAAGGC-CCAGAAGCTGTGGTACTCGATCCTGGAAGCGCAGATCGAGACGG 16374 Query 97216 GAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGG 97275 | | || | ||| || ||||| || | | || || || |||||||| || | | Sbjct 16375 GCAACCCCTTCATGCTGTACAAAGACTCGGCCAACCGTAAGAGCAACCAGAAGAACCTCG 16434 Query 97276 GCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGA 97335 |||| |||||| |||| || ||||| || || ||| | || ||| ||| ||||| |||| Sbjct 16435 GCACGATCAAGAGCTCGAACCTGTGTACAGAGATTATGGAATACAGCTCGCCGGAGGAGA 16494 Query 97336 CGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGAGGG 97384 |||| || ||| |||| || | |||||| | |||| | ||||| Sbjct 16495 CGGCCGTATGCAACTTGGCCTCCATTGCTCTGCCGACGTTTATCGAGGG 16543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058366308400