Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq40 134 1e-26 seq83 91.5 1e-13 seq20 86.0 6e-12 >seq40 Length=632444 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||| |||| || | |||||| || |||||||| || | ||| || |||||| Sbjct 154318 CCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154259 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| | | || || || |||||| Sbjct 154258 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGA 154199 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || ||||||||| | | | ||||| | ||||| Sbjct 154198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154139 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||||||||| || || || || ||||||||||||||||| Sbjct 154138 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| || | ||| || | ||| | |||||| || |||||||| || | ||| || ||||| Sbjct 154547 TCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCT 154488 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || ||| | |||||||||||| || || ||||||| | | || || || || || Sbjct 154487 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGG 154428 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 ||| || || ||||| | || || ||||||||| | | | ||||| | ||||| Sbjct 154427 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 154368 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||||||||| || || || || || || || |||||||| Sbjct 154367 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || |||||||| | ||| || ||||| | || | ||||||||||| || || Sbjct 62329 GTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGCTTACCC 62388 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | || || || ||||||||||| || ||||| | || || ||||| Sbjct 62389 GCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 62448 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | ||| ||||||| ||||| || | |||||| || || ||||| || || Sbjct 62449 ACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTC 62508 Query 94991 TTCACAAAGATCTGCATG 95008 || || ||||| |||||| Sbjct 62509 TTGACGAAGATTTGCATG 62526 >seq20 Length=159509 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||||| || || ||||| || | ||| || ||||||| ||| | |||||| Sbjct 51392 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 51333 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| ||||||| | | || || || ||||||||||| || ||||| | Sbjct 51332 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 51273 Query 94918 AATTTTTGCCTTGAC 94932 || || ||||| || Sbjct 51272 GATCTTGGCCTTCAC 51258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290695672400