Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq45 170 2e-37 >seq45 Length=36469 Score = 170 bits (188), Expect = 2e-37 Identities = 644/996 (65%), Gaps = 22/996 (2%) Strand=Plus/Minus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 |||||||| | |||||| ||| ||| | || || || |||||||| | || || | | Sbjct 16231 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 16172 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 63299 || | || | ||| || || | | | | |||||| || | || ||||| Sbjct 16171 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 16115 Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359 || || | ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 16114 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 16055 Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419 || || ||||| || || || || | ||| | || ||||| || | || | | ||| Sbjct 16054 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 15995 Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479 || | ||||||||| | ||| || || |||| ||||| || | ||||| ||| Sbjct 15994 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 15935 Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539 ||| ||| ||||| || || || ||| | || ||||| | || || || | Sbjct 15934 TTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGT 15875 Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599 ||||| ||||||||||| || || || ||||| | | || || || |||||| Sbjct 15874 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 15815 Query 63600 TGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 63657 || || || | || || || || || | || || || ||||||||||| |||| Sbjct 15814 TGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTT 15757 Query 63658 CAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 63716 |||| | |||| ||||| |||||||| || || || || ||||| ||||| Sbjct 15756 CAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACA 15698 Query 63717 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG 63776 || |||||||| | |||||||||||| | ||| | | |||| || || || || | Sbjct 15697 GCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGG 15638 Query 63777 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 63836 || || |||| || || || || ||| ||||||| |||||| || ||||||||| Sbjct 15637 TATGAACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATA 15578 Query 63837 ATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAA 63894 ||| | |||| ||| || | || | || | | | || ||| |||| Sbjct 15577 ATAGCAGAGTCGAGCACGTCGCGGTGCTTCATTACGGTGTGGAACGT--CTCTTCAGAAA 15520 Query 63895 TAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTT 63954 | || | || || || | || || || ||||||| | | ||||| || || | Sbjct 15519 TCATAGAGCTGTGCTTGCCCGTCTTCGGGTTCACATAGTCGTGCAGATCCTGAATGACCT 15460 Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATT--TGATACGGCTATTCTGGCGGCTAG 64012 ||||| || || || |||||||| || || |||| ||| || | || || || Sbjct 15459 GGCTAAAGCCCTTCTTCGTCTCCTTGTGCAGGTTGCTGAT--GGCGATACGCGCAGCCAG 15402 Query 64013 AATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGT 64071 | ||| || || |||||| || || | || ||| || | || || || || ||| Sbjct 15401 CACGGCGTAGTCGGGATGTGTCGTGGT-CTTGTAGGCAGCCGTCTCAGCAGCTAGGTTGT 15343 Query 64072 CCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAA 64131 ||| || ||||| || ||||| | || || || | ||| ||||| || |||| | Sbjct 15342 CCAGCTCGACCGTGGTAACTCCTTCGTAGATACCGTCAATTACCTTGCGAGTGATTTCGA 15283 Query 64132 TAGGATCTATATGATCCGTGTTTAAGCCATAACATA 64167 | ||||| || | | | ||| | |||||| |||| Sbjct 15282 TGGGATCAATGTAGTTCATGTCAAGGCCATAGCATA 15247 Score = 168 bits (186), Expect = 8e-37 Identities = 398/597 (67%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || ||| ||||||||||||||| | ||| || ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 |||| || |||||||| || |||||||| || ||||| || || || ||||| || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33472 || |||||||| || ||||| || |||||||| | ||| | ||| | | ||| ||| | Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 33473 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590 ||||| || || || || | | || | || || || |||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650 |||| | ||||| || ||||| ||||| ||||| || ||||| || || | ||| Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 33651 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTC 33710 |||||| ||| || || || | || || ||| | | ||| || ||||| || || || Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 33711 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 33767 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 33768 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||| ||||| || ||||| | |||||| || | || | || ||||| | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946499184400