Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq40 100 2e-16 seq83 93.3 3e-14 seq20 87.8 1e-12 >seq40 Length=632444 Score = 100 bits (110), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||| || || ||||| || |||||||||||| || ||| | | ||||||| || Sbjct 154294 TGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGC 154235 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | || || ||||||||||| ||| | |||||| ||||| || || Sbjct 154234 TTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTG 154175 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | ||| ||| | |||||||||||| || | Sbjct 154174 GC--CTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTGCCTG 154117 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 |||| || || ||||| ||||||||||| Sbjct 154116 TCAGGGTCTTCACAAAGATCTGCATTTT 154089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||| || || ||||| || |||||||||||| || ||| | | ||||||| || Sbjct 154522 TGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGC 154463 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | || || ||||||||||| || | |||||| ||||| || || Sbjct 154462 TTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTG 154403 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | ||| ||| | |||||||||||| || | Sbjct 154402 GC--CTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTGCCTG 154345 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| ||||||||||| Sbjct 154344 TCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| ||||| ||||||||||| |||||||||||| | || | ||||| Sbjct 62314 AGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCC 62373 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || ||||| | ||||| |||||||||||| ||| | ||||| ||||| Sbjct 62374 TCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 62433 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| || | ||||| | Sbjct 62434 TGGATCTTGGC--CTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCG 62491 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || ||||| || || ||||| Sbjct 62492 TCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 62525 >seq20 Length=159509 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || |||||||||||| || || | | ||| Sbjct 51394 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 51335 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || ||| | || || |||||||||||| ||| | ||||| ||||| Sbjct 51334 TCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 51275 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | |||||| | |||| || | |||||| | Sbjct 51274 TGGATCTTGGC--CTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCG 51217 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||| || ||||| || | ||||| Sbjct 51216 TCTTACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087555669100