Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq45 156 5e-33 >seq45 Length=36469 Score = 156 bits (172), Expect = 5e-33 Identities = 395/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || || || ||| ||| ||||||||||| | ||| | ||||| || Sbjct 3087 AACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 3146 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 3147 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 3206 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 32829 || ||||| || || ||||| ||||||||||| | ||| | ||| | | ||| ||| | Sbjct 3207 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 3265 Query 32830 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 3266 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTC 3325 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 || || || || || || | | || | || || ||||||| || Sbjct 3326 AATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 3385 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 |||| | ||||| || ||||| ||||| || || || ||||| ||||| | ||| Sbjct 3386 CGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 3445 Query 33008 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 33067 |||||| ||| || || || | || || || | | ||| || ||||| || || || Sbjct 3446 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 3505 Query 33068 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 33124 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 3506 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 3565 Query 33125 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 3566 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 3625 Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 3626 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 3682 Score = 145 bits (160), Expect = 1e-29 Identities = 452/692 (65%), Gaps = 12/692 (2%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| ||| | |||||||| | |||||| ||| ||| | || || || ||| Sbjct 16249 AGGCCAGGTGCTTCGGCGGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTC 16190 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT-- 63137 ||||| | || || | ||| | || | ||| || || | | | | |||||| Sbjct 16189 ATAAACAAGTCGGGGACCCACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCT 16133 Query 63138 TTCCTGTA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 || | || ||||| || || | ||| | | | ||| || ||||| || |||| | Sbjct 16132 TTGCCGTGGTTCTTGCGCAGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGG 16073 Query 63197 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 || ||||| | | || || || ||||| || || || || | ||| | || ||||| Sbjct 16072 TAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTG 16013 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAG 63316 || | || | | ||| || | |||||| || ||| || || || | ||||| Sbjct 16012 TTGAATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATAC 15953 Query 63317 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 || | ||||| |||||| ||| ||||| || || || ||| | || ||||| Sbjct 15952 GAGCCTGTAGCACGGATATTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATC 15893 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | || || || | || || ||||| ||||| || || ||| ||||| | | Sbjct 15892 ATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACG 15833 Query 63437 AGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63494 || || || |||||||| || || | || || || || || | || || || | Sbjct 15832 AGGAAGCACGACGACATTTGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATG 15775 Query 63495 CGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC 63553 |||| ||||| |||||||| | |||| ||||| |||||||| || || || || Sbjct 15774 CGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCT 15716 Query 63554 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 ||||| ||||| || |||||||| | |||||||||||| | ||| | | |||| Sbjct 15715 TCGCCGTGAATACCTACAGCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTG 15656 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63673 || || || || ||| || |||| || || || || ||| ||||||| | Sbjct 15655 CCATTGATGCGCAGCAGGTATGAACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGA 15596 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 ||||| || |||||||||||| | |||| ||| Sbjct 15595 AAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 15564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631287164000