Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq20 125 6e-24 seq83 113 4e-20 seq40 109 5e-19 >seq20 Length=159509 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| ||||| ||||| | ||||| |||| |||||||| || Sbjct 51183 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 51242 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 51243 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 51302 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||| || || | || |||| ||||| || |||| ||||| Sbjct 51303 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 51362 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || | ||||| Sbjct 51363 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 51394 >seq83 Length=398874 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||| || || | ||||| |||| || ||||||||| Sbjct 62525 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 62466 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 62465 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 62406 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | || || | || || | |||| ||||| Sbjct 62405 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 62346 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || ||||| ||| | ||||| Sbjct 62345 ATCCAAAAGGAGTCGACGCTCCATCTCGTGCT 62314 >seq40 Length=632444 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| |||| || ||| ||||||| | ||||| ||||| || Sbjct 154091 AATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCTTC 154150 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| || ||| ||||| || || ||||| |||||||| Sbjct 154151 GGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 154210 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| || || || | || |||| ||||| || |||| ||||| Sbjct 154211 ACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAA 154270 Query 25178 TATTCAAAAAGAATCCAC 25195 || || || ||||| || Sbjct 154271 CATCCAGAAGGAATCGAC 154288 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || ||| ||||||| | ||||| ||||| || Sbjct 154320 ATGCAGATTTTCGTCAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCTTCG 154379 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || ||||| ||||||||| Sbjct 154380 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAA 154439 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || | || |||| ||||| || |||| ||||| Sbjct 154440 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAAC 154499 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || || || ||||| || | || | |||||| Sbjct 154500 ATCCAGAAGGAATCGACATTGCACCTTGTGCTA 154532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327524693350