Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq40 114 1e-20 seq20 107 2e-18 seq83 95.1 1e-14 >seq40 Length=632444 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| || || | || || ||||| |||| |||||||| || | Sbjct 154089 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCT 154148 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| | |||| || || || ||||||||||| ||||| || || Sbjct 154149 TCGGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGAC 154208 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || ||||| || || ||| | |||||| ||||||| | ||| ||| Sbjct 154209 CAACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 154268 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| || | || | ||| |||| ||||| || ||| Sbjct 154269 AACATCCAGAAGGAATCGACATTGCACCTTGTTCTGCGTTTGCGTGGCGGT 154319 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| |||| |||||||| || | | Sbjct 154320 ATGCAGATTTTCGTCAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCTTCG 154379 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| ||||| || || ||| Sbjct 154380 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAA 154439 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| ||||||| | ||| |||||| Sbjct 154440 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAAC 154499 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | || | || | || |||||||| || Sbjct 154500 ATCCAGAAGGAATCGACATTGCACCTTGTGCTACGTTTGCGCGGTGG 154546 >seq20 Length=159509 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || || || ||||| ||| |||| || || ||||| | || Sbjct 51183 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 51242 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||||||||| || || ||| Sbjct 51243 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 51302 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||| | |||||| |||||| | ||| |||||| Sbjct 51303 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 51362 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 51363 ATCCAGAAGGAGTCGAC 51379 >seq83 Length=398874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || ||| |||| || || || || | | Sbjct 62525 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 62466 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||||||||| || || ||| Sbjct 62465 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 62406 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| ||| || || ||| |||||| Sbjct 62405 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 62346 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 62345 ATCCAAAAGGAGTCGAC 62329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727539610850