Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq19 192 1e-43 seq18 98.7 2e-15 seq29 89.7 1e-12 >seq19 Length=188843 Score = 192 bits (212), Expect = 1e-43 Identities = 352/514 (68%), Gaps = 4/514 (1%) Strand=Plus/Plus Query 218503 AACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTG 218562 ||||| || || ||||||| ||| ||||||| || |||||||| ||| | ||| Sbjct 106067 AACATTCCTATCTCTGACTTTATCAACAAGGAACTGATTCTTTTTTCGATGGCTGACAAT 106126 Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 || || |||||||| || ||||||||||| || || |||||| ||| | || || Sbjct 106127 ATCCGCTCGATTCCCAGTGTTGTGGATGGCCTAAAACCGGGGCAGCGCAAGGTTCTGTTC 106186 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 | | || ||||| || || |||||| || ||| ||| || |||||||| Sbjct 106187 GGCTGCTTTAAGCGTAATCTCAAGACAGAAATCAAAGTCCAACAGCTTCAGGGTTATGTG 106246 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCA 218740 || || | | | || || || || || ||||||||| || | | ||||| ||| Sbjct 106247 TCAGAGCATACGGCGTATCACCATGGCGATCAGAGTCTGGTCATG--ACGATTGTTGGCC 106304 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTG 218800 | || |||||||| |||||||||||| ||||||||||||| |||||||||||||||| Sbjct 106305 TTGCGCAGGACTACTGCGGCAGTAACAACGTGAACTTGCTGCTGCCCAACGGTCAGTTTG 106364 Query 218801 GTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGT 218860 || |||| |||| || |||||| || ||| | || || || || || Sbjct 106365 GTACTCGAAGCATGGGCGGTAAGGATGCAGCCAGTGCACGTTACATTTTCACGGCAGTGC 106424 Query 218861 CGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGG 218920 | | | | ||||| | | ||||| ||| | ||||| | ||||| || || || || | Sbjct 106425 CACGCATCACGCGTCTGATGTTCCATCCGAAAGATGACGACCTCCTCAACTACCTGGATG 106484 Query 218921 ACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAA 218980 |||||||| |||||||| |||||||| || |||| | | ||| | |||| | | Sbjct 106485 ACGATGGTCAGAGTATTGAGCCGGAGTGGTACGTTCCTGTTGTACCGCATGTGCTGCTCA 106544 Query 218981 ATGGTGCCAATGGTATCGGGACAGGGTTCAGTAC 219014 | ||||| | || || || || || | ||||| Sbjct 106545 ACGGTGCTGAGGGAATAGGTACGGGCTGGAGTAC 106578 >seq18 Length=1036329 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 683939 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTTGCCTACGGTGCCAAGATTCTGCTGAAC 683880 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||| |||| || |||||| |||| || || || Sbjct 683879 ACGGCCACCCTGCGTCTTAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCG 683820 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCT 279518 |||||| || || ||||| ||||| ||||||||| | || || || ||| Sbjct 683819 GGTAAGTCGACGCTCATGCGTGCCATCCAGAACGGTCAGGTTGAGGGCTTCCCT 683766 >seq29 Length=735607 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || |||||||||||| |||||| ||||| || ||||||||||| Sbjct 102668 GGTGTCATTGGCCCGAACGGTGCGGGTAAGAGTACCCTGATCAAGGTGCTGACTGGCGAA 102609 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | | ||||| || ||||| || ||| |||| | || | || Sbjct 102608 ATTGTGCCGAACGAGGGCAAGGTCGAAAAGCACCCGAACCTGCGCGTCGCCATGATGGCC 102549 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 ||||| || ||||| ||| | ||| | |||||||| | |||| | ||| ||||| | Sbjct 102548 CAGCATGCCTTCCATCACCTTGAGCAGCACCTGGAGAAGACTGCATGCCAGTACATCCGC 102489 Query 280350 TGGCGCTATGCAAG-TGGGCAGGATC 280374 ||||| || |||| ||| || |||| Sbjct 102488 TGGCGTTA-CCAAGATGGCCATGATC 102464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835614775690