Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq45 156 8e-33 seq40 154 3e-32 seq20 150 3e-31 seq83 136 7e-27 seq18 93.3 8e-14 >seq45 Length=36469 Score = 156 bits (172), Expect = 8e-33 Identities = 358/529 (68%), Gaps = 19/529 (4%) Strand=Plus/Plus Query 9963 ACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAG 10022 || ||||||||||| ||||| |||||||| | || ||||| |||||| ||||||||| Sbjct 2820 ACGCGGCGCTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATATTCTCCATAAAGTCAAAG 2879 Query 10023 GGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACG 10082 |||||| | | | ||||| ||| | || || || | | |||||| ||||| Sbjct 2880 GGGTTCGTCGAGTGGTAGTGCTTCGGGCAGCCCAGCGCCACCAGCAGGCGGTCCGCCACA 2939 Query 10083 AACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCG-GCAGGGGATGGC 10141 || || |||||||||| ||||||| || ||||| ||||| | ||| | ||| | ||| Sbjct 2940 AATTCAATGTACTGGCACATCAGGCGCGCATTCATACCAATGA-GCGAGACGGGCAGGGC 2998 Query 10142 GTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCACGTC 10201 || | | ||||||| || |||| || || ||| || |||| || ||| ||| Sbjct 2999 ATCCGACAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTGATAATGCGGTTCACCGTGTC 3058 Query 10202 AAGG---GACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAG 10258 || || |||| ||| | | | || |||| || |||| | ||| || Sbjct 3059 GGGGTGCGAGCGCTTCTTCAGGTGGCT-GA--ACAGCAGGCACGCAAAGTCGGTGTGCAG 3115 Query 10259 GCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTT 10318 |||||||| || || | |||||| || || ||||||||||||||| || || || Sbjct 3116 ACCCTCGTCACGCGAAATAAGCTCGTTCGAGAACGACAGACCGGGCATGAGACCACGCTT 3175 Query 10319 GCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACGCACACC 10376 |||||||| || | | |||||| || |||| |||||| ||||| ||| | | Sbjct 3176 CTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGA--AGAAGATGCCCTCTACGGCCGCA 3233 Query 10377 CAGGCGACGAGGCGCTCTGCGAAGGAG---CGGTCGCGCGAAAAGTATTTCGA--GGCCC 10431 |||| || |||||||| | ||| ||| || | | ||| | | ||| |||| Sbjct 3234 AAGGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGA--TCCAGCGAAGCGCCC 3291 Query 10432 ACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAG 10480 || | |||||||| ||| |||| |||||||| || || | ||| || Sbjct 3292 ACTCGGCCTTCTTCTTCACAACAGGAATCGTCTCAATGGCGTTGAACAG 3340 >seq40 Length=632444 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | ||| ||||| | || | || | ||| | || || || || |||||||| | Sbjct 154554 TTTATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGT 154495 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| || || | ||||| || | |||||| || || || || || | ||||||| Sbjct 154494 AGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGT 154435 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||| |||||||| || ||||| ||||||||| || || ||||| | | Sbjct 154434 CAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAG 154375 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||| | |||||||||||| || || |||||||||||||| |||||||| Sbjct 154374 ACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| || | ||| | || || || || |||||||| || ||| || || | ||| Sbjct 154306 CGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 154247 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || | |||||| || || || || || | |||||||| || |||||||| |||||| Sbjct 154246 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTG 154187 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || ||||| ||||||||| || || ||||| | || || ||||| | ||||||| Sbjct 154186 TCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATG 154127 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || |||||||| || || ||||||||| Sbjct 154126 GTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATT 154091 >seq20 Length=159509 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 51409 CCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 51350 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | |||||||| || ||| Sbjct 51349 AGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 51290 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 51289 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 51230 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || ||||| | |||||||||||| | ||||| ||| Sbjct 51229 TCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCATGATG 51179 >seq83 Length=398874 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || ||||| ||||| ||||||||||| || ||| ||| || | || || || | |||| Sbjct 62323 TGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGC 62382 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || || | |||||||| || ||||| || |||||||| || ||||| Sbjct 62383 TTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 62442 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || ||||| ||||| | || || || || | ||||| || || || || Sbjct 62443 GCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTC 62502 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || ||||| Sbjct 62503 AGGGTCTTGACGAAGATTTGCAT 62525 >seq18 Length=1036329 Score = 93.3 bits (102), Expect = 8e-14 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 224465 ACACCGCCGCCGAATGACTCAAGGGCGG--ATGAAAGC-GCGCCAAGCGACTCGCGGTCA 224521 ||||| || |||| |||| | |||| || | ||| ||| |||||||| ||||| Sbjct 682405 ACACCACCCTCGAACGACTGGATAGCGGCAATCAGAGCAGCG---AGCGACTCACGGTCC 682461 Query 224522 AGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGCTGCACCA 224581 | |||||| || ||||||||||| | ||| | |||||| ||||| || ||||| Sbjct 682462 AAGAAGTTGGTGGGCTCATCCAGCACGATGATGTGGGGCATACGCCACGTAGCGGCACCC 682521 Query 224582 ACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGAGTGAGTCGTGAAT 224641 | ||| | ||| ||||| ||||| |||||||| || || || ||| | |||||| Sbjct 682522 AGCACAACCTTGACCTTTTGACCACCAGAGAGACCACGCATGGTGTTGTGCGACGTGAAC 682581 Query 224642 TCGGGGTCAAGACCAA 224657 || | |||||||||| Sbjct 682582 TCACGCTCAAGACCAA 682597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621363174800