Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq40 131 1e-25 seq83 113 4e-20 seq20 93.3 4e-14 >seq40 Length=632444 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| | | || ||| | || | || ||||| || || |||||||| ||| Sbjct 154321 ATACCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCG 154262 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||| || || || |||||||| |||| || ||||||||||| ||| Sbjct 154261 CTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGA 154202 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | |||| ||||| | || ||| Sbjct 154201 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCG 154142 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| ||||| || || ||||| |||||||| Sbjct 154141 ACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| ||||||| || || ||| || || || |||||| Sbjct 154516 GTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCA 154457 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || ||||||||||| || |||||||| || ||||| ||||| || Sbjct 154456 GCAAAGATCAGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 154397 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | || ||||| || | ||| | |||||||| ||||| || Sbjct 154396 ACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTC 154337 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 154336 TTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||| | ||| || || ||||| |||||||| ||||| | ||||| || || || || Sbjct 62322 ATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTG 62381 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 ||||| ||| |||| ||||||||||||||||||||||| || || ||||| ||||| Sbjct 62382 CTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 62441 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 || | | || | ||||| | || ||||| || | || | ||| ||||| || Sbjct 62442 GGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGT 62501 Query 114359 CAGAGTTTTTACAAAAATCTGCATGGC 114385 ||| || || || || || |||||||| Sbjct 62502 CAGGGTCTTGACGAAGATTTGCATGGC 62528 >seq20 Length=159509 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| || || ||| || || || ||||| Sbjct 51380 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCCAGCTGCTTACC 51321 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| ||||||||||||||||||||||| || || ||||| ||||| || Sbjct 51320 GGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTT 51261 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | ||||||| || || || || | ||| | ||| || || |||| || Sbjct 51260 CACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCCGTCAAGGT 51201 Query 114365 TTTTACAAAAATCTGCATG 114383 || || || | |||||| Sbjct 51200 CTTGACGAACACTTGCATG 51182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133939165080