Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq18 127 5e-24 seq19 91.5 3e-13 seq45 84.2 5e-11 >seq18 Length=1036329 Score = 127 bits (140), Expect = 5e-24 Identities = 305/458 (67%), Gaps = 9/458 (2%) Strand=Plus/Plus Query 333903 TGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 333962 ||||| || ||||||||||| || || | | || || | |||| ||||| ||||| Sbjct 683497 TGGTTCGTGGGCTCGTCAAGCAGCAGGATATCAGCCTTGAACAGCACAGCACGCGCAAGG 683556 Query 333963 GCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 334022 ||||||||||| ||||| || || || |||| |||| ||| ||| || |||| | Sbjct 683557 GCGAGTTTCATCTTCCAACCACCAGAGAGAGCCGTAATGGGGCCAGCCTGACGCTGCTCA 683616 Query 334023 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 334082 || ||||| | | | || || | | | || || | ||| | || Sbjct 683617 TCGAAGCCCATCTCCTGAAGCGTCTTGGAAGCCGTCTCGCG-GTCCACGT----TCAGAC 683671 Query 334083 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGA 334142 ||||| || ||| || ||||| | || | |||| | || || ||||||||| Sbjct 683672 GCTTGTCGGTC--TGG--ATAAAGTCCAGAATCGAGATGTCACCCTCTGATCCGTCGAGA 683727 Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| || || | || | || ||||| || |||| ||||||| Sbjct 683728 TCGTGCTCAACGTACCACGTGCGCACCTCTTCGGGCGAAGGGAAGCCCTCAACCTGACCG 683787 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 ||| || || ||||| || || || ||||||| ||||| | ||||| ||||||||| Sbjct 683788 TTCTGGATGGCACGCATGAGCGTCGACTTACCCGAACCGTTACGACCACAGAGACCGTAG 683847 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 |||| |||||||| ||| | | ||||||| ||||| || |||| || || Sbjct 683848 CGGTGGCCACGCTTAAGACGCAGGGTGGCCGTGTTCAGCAGAATCTTGGCACCGTAGGCA 683907 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 334360 || || || | ||| | |||||| ||||| || |||| Sbjct 683908 AGCGAGAACTGACAGTTACACAGGTCCTCGCCCTCTTC 683945 >seq19 Length=188843 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/231 (71%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC-TGCAATCTCGAACCGAACTG 297495 |||||||| || |||||||| || ||||||||| ||| ||| || | ||| ||||| Sbjct 106416 GTGAAAATGTAACGTGCACTGGCTGCATCCTTACCGCCCATGCT-TCGAGTACCAAACTG 106358 Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555 || | |||| || | |||| | ||| || || ||| || ||||| |||||| || Sbjct 106357 ACCGTTGGGCAGCAGCAAGTTCACGTTGTTACTGCCGCAGTAGTCCTGCGCAAGGCCAAC 106298 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 || ||| || ||| || |||||||||||||| || ||||||||| || ||| Sbjct 106297 AATCGTCA--TGACCAGACTCTGATCGCCATGGTGATACGCCGTATGCTCTGACACATAA 106240 Query 297614 CCGCTGAA-CTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGC 297663 || ||||| |||| || || | || ||| | | ||| ||||| ||||| Sbjct 106239 CC-CTGAAGCTGTTGGACTTTGATTTCTGTCTTGAGATTACGCTT-AAAGC 106191 >seq45 Length=36469 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||| ||||| | || ||| | |||||||| ||||| || || |||||| | Sbjct 2984 GCTCATTGGTATGAATGCGCGCCTGATGTGCCAGTACATTGAATTTGTGGCGGACCGCCT 2925 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | ||||| || | ||| ||| |||| | ||||||||||| ||||||||| Sbjct 2924 GCTGGTGGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTGACTTTATGGA 2865 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | |||||||| ||||| || | ||||| ||||| Sbjct 2864 GAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGA 2829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878728241500