Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq40 120 3e-22 seq83 104 3e-17 seq20 86.0 7e-12 >seq40 Length=632444 Score = 120 bits (132), Expect = 3e-22 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 ||||||| || | |||||||| ||||| || || ||||| || ||| || || Sbjct 154309 AAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 154250 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 | || || |||||||||||||| || || || ||||| ||||| | || | || |||| Sbjct 154249 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCC 154190 Query 42111 TTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGT 42169 |||||| ||| || |||| ||| | || |||||| || || || || | || Sbjct 154189 TTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGT 154131 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 |||||||||||| || || ||||| |||||||| ||||||||| Sbjct 154130 GATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTTC 154088 Score = 107 bits (118), Expect = 2e-18 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 ||||| | || || | ||||| | ||| | |||||||| ||||| || || |||| Sbjct 154554 TTTATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGT 154495 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 | || ||| || || | || || |||||||||||||| || || || ||||| |||| Sbjct 154494 AGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGT 154435 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTC 42152 | | || | || |||||||||| ||| || |||| ||| | || |||||| Sbjct 154434 CAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAA 154376 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || | |||||||||||||| || || ||||| || || || ||||| Sbjct 154375 GACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || || || |||| || ||||||||||| ||||| Sbjct 62334 CTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGCTTACCCGCGAA 62393 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||| ||||| | || | | |||||||||| ||| || || | | Sbjct 62394 GATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 62453 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || || |||| |||||| || ||||| || || ||||| || Sbjct 62454 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGAC 62513 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 62514 GAAGATTTGCAT 62525 >seq20 Length=159509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| |||| || |||||| || || ||||| || ||| || || | || || Sbjct 51392 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 51333 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||||||||| || || || || ||||| ||||| | || | | |||||||||| Sbjct 51332 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 51273 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | || | | ||||||| || ||||| |||| ||||| || || Sbjct 51272 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 51213 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| | ||||| || || | |||||| Sbjct 51212 ACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212188885600