Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq40 136 4e-27 seq45 127 2e-24 seq83 105 6e-18 seq20 105 6e-18 seq27 84.2 2e-11 >seq40 Length=632444 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| || || | ||| | || | || || || || || || ||||| |||| Sbjct 154547 TCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCT 154488 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || ||||| || ||||| |||||| ||||| || || || || Sbjct 154487 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGG 154428 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| || ||||| ||||| | | ||||||| | ||||| Sbjct 154427 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT-CAATCGTGTCCGAAGACTCGA 154369 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | |||||||| ||||| || || || ||||||||||| Sbjct 154368 CTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| |||| || ||||| ||| || ||||| || ||| Sbjct 154288 GTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCA 154229 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| ||||| || || ||||| ||||||||||||||| ||| || |||| Sbjct 154228 GCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 154169 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||||| | ||||||||| | ||| | |||||||| ||||| || Sbjct 154168 ACGTTG-TCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGT 154110 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 154109 CTTCACAAAGATCTGCAT 154092 >seq45 Length=36469 Score = 127 bits (140), Expect = 2e-24 Identities = 284/425 (67%), Gaps = 11/425 (3%) Strand=Plus/Minus Query 47159 CGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGG 47218 ||| |||||| |||||||||||||| || || |||| || | | || | || Sbjct 3227 CGTAGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGG 3168 Query 47219 AGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACAC 47278 | |||||||| || |||| |||||||| || ||| | ||||| || |||||||| Sbjct 3167 TCTCATGCCCGGTCTGTCGTTCTCGAACGAGCTTATTTCGCGTGACGAGGGTCTGCACAC 3108 Query 47279 CAACTTTGCCTGTCTCTACTACAACA--CT--AGAGTCGATCAAAAGTTGGACGTGCCCA 47334 | ||||||| || || | || | || ||| || || | || || Sbjct 3107 CGACTTTGCGTGCCTGCTGTTCAGCCACCTGAAGAAGCGCTC-------GCACCCCGACA 3055 Query 47335 CCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTC 47394 | || | | ||| | | || || || ||||||||| ||| ||||| | || || | Sbjct 3054 CGGTGAACCGCATTATCACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGTCGGATGCCC 2995 Query 47395 TGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCG 47454 |||||| || | | || ||||| ||| ||||| | ||||||| |||||||| | Sbjct 2994 TGCCCGTCTCGCTCATTGGTATGAATGCGCGCCTGATGTGCCAGTACATTGAATTTGTGG 2935 Query 47455 CCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCG 47514 | ||||||||||| || ||| | || ||| |||||| | ||| || || | Sbjct 2934 CGGACCGCCTGCTGGTGGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTG 2875 Query 47515 AGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCG 47574 | |||||| | || |||||||| | |||||| | |||||||||||| ||||| |||| Sbjct 2874 ACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGAGCGCCGCGTGGGCG 2815 Query 47575 AATAT 47579 | ||| Sbjct 2814 ACTAT 2810 Score = 95.1 bits (104), Expect = 1e-14 Identities = 380/587 (65%), Gaps = 21/587 (4%) Strand=Plus/Minus Query 146925 GGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAAT 146984 |||||| | |||||||| |||| |||| || || || | ||||||||| ||||| | Sbjct 16232 GGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGAC 16173 Query 146985 CCAAAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAA 147044 ||| | | ||| | || ||| ||||| | || || ||| ||| | || Sbjct 16172 CCACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTCTTGCGCAG 16113 Query 147045 GTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTT 147104 || | | || | | |||| ||||| ||||||| ||| ||| | |||||| Sbjct 16112 GTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGG 16053 Query 147105 TCGCTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGA 147161 ||||| || || || ||||||| ||| || |||| ||||| || || | ||||| Sbjct 16052 GCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGG 15993 Query 147162 CACGAGGCCGC--CGGATTTTGTG-GTGCCGTTG-TAT-------TG-AGCGCTGACGCT 147209 ||| | ||| | || || |||||| ||| || ||| | || | Sbjct 15992 CACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATT 15933 Query 147210 TTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGAC-TCGTGCAAGG 147268 || | | |||| || | || ||| || || || |||| ||| | || || | | Sbjct 15932 ATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTG-AGTG 15874 Query 147269 TCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTT 147328 | | |||||| || ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct 15873 TGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTT 15814 Query 147329 GGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAG 147386 | ||| ||| || || ||||||||||| |||||||| || | | ||| Sbjct 15813 GCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAG 15754 Query 147387 ACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGC 147446 || | | ||| || || ||||| |||||| || ||| ||||||||||| | | || Sbjct 15753 ACATGT-AGTTG-TAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGC 15696 Query 147447 GACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 || ||||| ||||||||||| || || || || | | | |||||| Sbjct 15695 CACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGA 15649 >seq83 Length=398874 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | ||| ||||| ||||| || ||||| |||| | ||| || || || Sbjct 62316 CACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 62375 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||| | ||||| || || ||||| || |||||||||||| Sbjct 62376 CAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 62435 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||| | | |||| ||||| | |||||| |||| || | ||| || Sbjct 62436 GATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTT 62495 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 ||| ||||| || || || || || |||||||| Sbjct 62496 GCCAGTCAGGGTCTTGACGAAGATTTGCATGGC 62528 >seq20 Length=159509 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | ||| ||||| || || || ||||| ||| Sbjct 51412 GCACCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 51353 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| ||| || ||||| || || || |||||| ||||| || || ||| Sbjct 51352 CTCAGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGA 51293 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 51292 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 51233 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||| | ||| || || |||| || || || || | |||||| Sbjct 51232 ACCTCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCATG 51182 >seq27 Length=111450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| | | ||| | ||| || |||||||| || | ||| ||| Sbjct 8654 GCGCCACCACGCAGACGCAGTTCGAGATGCAGCGTCGATTCTTTTTGGATCTGGTAGTCG 8713 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| || || ||||| || || || ||| | ||||||| |||||| Sbjct 8714 CTCAGCGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGAGAAGGCGCTGCTCATCGGGG 8773 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCT-C 127062 || ||||||| ||| | ||||| ||| | || || ||||| || | ||||| | Sbjct 8774 GGGATGCCCTGCTTACGCTGGATTTGAGCCTTTACATGATCCACGGTATCTG-ACTCTTC 8832 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 ||| || | || | | ||| | || ||||| |||||||||||||||| Sbjct 8833 GACGTCCAGCGTGATAGAGGAGCCCGAGAGTGTTTTGACAAAAATCTGCATGG 8885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500265061600