Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq40 102 7e-17 seq45 93.3 4e-14 seq83 91.5 1e-13 >seq40 Length=632444 Score = 102 bits (112), Expect = 7e-17 Identities = 171/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165 |||||| || ||||| | | | ||| || |||| || |||||||| ||||| || | Sbjct 154554 TTTATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGT 154495 Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225 | ||||| | ||| ||| |||| || || || || | |||| || || |||| Sbjct 154494 AGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGT 154435 Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284 | || |||||||| || || || || || || |||| || | || | ||||| ||| Sbjct 154434 CAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAA 154376 Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCG 45344 ||||||||||| || || | |||||||| || || || || || ||||| ||||| || Sbjct 154375 GACTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCATACCG 154316 Query 45345 CGAC 45348 | || Sbjct 154315 CCAC 154312 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || |||| || |||||||| ||||| || || ||||| | ||| ||| ||| Sbjct 154300 ACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCC 154241 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || || | |||| || || ||||| || |||||||| || || || || Sbjct 154240 AGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 154181 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||| |||||||||||||| || || | ||||| Sbjct 154180 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTT 154122 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || ||||| || ||||| Sbjct 154121 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 >seq45 Length=36469 Score = 93.3 bits (102), Expect = 4e-14 Identities = 178/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116 ||||| ||||||| | |||| |||||||||||| | || ||||||||||| |||| Sbjct 16831 ACGGCACGTACGAGACATACGAGGGCAGCCCGGCCTCGCAGGGCATTTTGCAGTATGACA 16890 Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGA-GCGTTTTAAAACAACGCATATCG 124175 ||||||| || || | || |||||||||||| | | || | | | || | Sbjct 16891 TGTGGAACCGCACGCCCTCTGATCTGTGGGACTGGACGGCCCTCAAGGCCAAG-ATTGCC 16949 Query 124176 ACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAA 124235 | ||| || |||| || |||||| || | ||| |||||||| || | || ||| Sbjct 16950 AAGCATGGCCTGCGGAATTCGCTGCTGCTTGCGCCGATGCCGACCGCCTCGACAAGTCAG 17009 Query 124236 ATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTG 124295 || | || ||||| | ||| ||||||| ||| | ||| | ||| |||| || ||| Sbjct 17010 ATCCTTGGCTTTAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTG 17069 Query 124296 TTAGCCGGCGATTTTCAAGT 124315 | ||||| || || || || Sbjct 17070 CTCGCCGGTGAGTTCCAGGT 17089 >seq83 Length=398874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| ||||| || ||||||||||| || || ||||||| || || || Sbjct 62316 CACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 62375 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || || || || ||| | || | || || |||||||| ||||| || || || || || Sbjct 62376 CAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 62435 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | ||||| || |||||||| ||||| || | ||| || Sbjct 62436 GATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTT 62495 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 ||| || || || || || || |||||||| || Sbjct 62496 GCCAGTCAGGGTCTTGACGAAGATTTGCATGGC 62528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002691496400