Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq45 159 6e-34 >seq45 Length=36469 Score = 159 bits (176), Expect = 6e-34 Identities = 296/429 (69%), Gaps = 9/429 (2%) Strand=Plus/Plus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||| | || || || ||||| || | || |||||| | Sbjct 2828 CTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATATTCTCCATAAAGTCAAAGGGGTTCGT 2887 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | ||| ||| ||||||| | || || ||| |||||| | ||| ||||||||||| || Sbjct 2888 CGAGTGGTAGTGCTTCGGGCAGCCCAGCGCCACCAGCAGGCGGTCCGCCACAAATTCAAT 2947 Query 159772 GTAGCTACACATCTG-CTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACA 159830 ||| |||||| | | | || || || || | ||| ||||| || || ||||||| Sbjct 2948 GTACTGGCACATCAGGCGCGCA-TTCATACCAATGAGCGAGACGGGCAGGGCATCCGACA 3006 Query 159831 GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCCG 159890 ||| |||| |||||| | || || || || | ||| ||| ||| ||| | | Sbjct 3007 AAAAGTCCTGCTCAATGGCCACAGCCTCCGTGATAAT--GCGGTTCAC---CGTGTCGGG 3061 Query 159891 G--CTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948 | | || | | ||| | ||||| ||||||||||||||| |||||| ||||| Sbjct 3062 GTGCGAGCGCTTCTTCAGGTGGCTGAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTC 3121 Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008 ||| || || || | |||||| || | || || ||||||| |||||| ||||| Sbjct 3122 GTCACGCGAAATAAGCTCGTTCGAGAACGACAGACCGGGCATGAGACCACGCTTCTTGAG 3181 Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068 ||| || || | || || | || || ||||| ||||| ||||||||||| ||||| Sbjct 3182 CCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCAC 3241 Query 160069 GAGCCTCTC 160077 || | ||| Sbjct 3242 AAGGCGCTC 3250 Score = 127 bits (140), Expect = 3e-24 Identities = 526/817 (64%), Gaps = 16/817 (2%) Strand=Plus/Minus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 |||| ||||| || |||| ||| || ||| | | || | | || |||||| | Sbjct 16474 TCCATAATCTCTGTACACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTTCTGGTTGCTC 16415 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGC 205003 || ||||| ||||| ||||||| |||||| || | || |||| ||||| | | | Sbjct 16414 TTACGGTTGGCCGAGTCTTTGTACAGCATGAAGGGGTTGCCCGTCTCGATCTGCGCTTCC 16355 Query 205004 AGAATGTGGGTCCACAATTCGCGAGCCTCCACT-TGCTTCACGTACATCCCTTGAGACTC 205062 || || | ||||| | | |||| || ||| | || ||||| | | ||| Sbjct 16354 AGGATCGAGTACCACAGCTTCTGGGCCTTGACCGTGCGCTTAGCACGTCCCTCGCG-CTC 16296 Query 205063 GTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTT 205122 ||| ||| ||||||| | |||| || || || ||| || || || || Sbjct 16295 GTACTTTTCGTACAGCTGCTCAAACTCTTCGCCATAGCAGTCAGAAAGGCCAGGTGCTTC 16236 Query 205123 TTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCCTCTCCATAAACAGGTC 205179 ||||||||| || ||||| ||| |||| ||| || | || |||||||| ||| Sbjct 16235 GGCGGGACACATAAGCGACCAG-TCT--TCGTTCTTCTCAACACGCTTCATAAACAAGTC 16179 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 | || ||||| | | ||||||| ||||| || | | |||| | || ||||||| Sbjct 16178 GGGGACCCACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTCTT 16119 Query 205240 TTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298 || ||| | | || | | | || | |||||| ||||| | | | ||| | || Sbjct 16118 GCGCAGGTCAA-CAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATG 16060 Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCA 205358 |||| || | |||||| ||||| ||||| || ||| | | | |||||| || || | Sbjct 16059 CGCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAA 16000 Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCC 205418 |||| ||||| | |||||| | |||||||||| | || ||||||| ||| | Sbjct 15999 GCATGGGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCAC 15940 Query 205419 TCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCAC-TCT 205477 | || ||| | ||||| ||||| | ||| | |||| || || ||| Sbjct 15939 GGATATTATGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCT 15880 Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537 || || ||| |||||| || |||| || |||||| || |||| || ||||||| Sbjct 15879 TG-AGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGAC 15821 Query 205538 GCCAGCTTGGCAAAGTTGGTG--CCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGC 205595 | || || || | | || | || |||| ||| |||||||| ||||| | || Sbjct 15820 GACA--TTTGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAG 15763 Query 205596 GCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATAC 205655 ||| || || | |||||||||| | | ||||||| | || ||||||||||| Sbjct 15762 CCTTTTCAGACATGTAGTTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATAC 15703 Query 205656 CTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692 ||| || | | ||| | | ||| ||||| | ||| Sbjct 15702 CTACAGCCACACGCATAAGCATGTGCTGAGGCCGCTC 15666 Score = 118 bits (130), Expect = 2e-21 Identities = 446/682 (65%), Gaps = 16/682 (2%) Strand=Plus/Minus Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905 ||||| ||||| || || | |||| || | | | || |||||| ||||||||| Sbjct 17437 ACCGTAAACTGGATCGCACTGGCGGCGGGACGTGTGCGAAGGTAGTACGAGCCGGTCTTG 17378 Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTGGGGTCGGC 203964 || ||||||| ||| ||||| | |||||| || | || | | | || ||||| || Sbjct 17377 AGACCCTTCTTCCAGCCGTAAAAGTGCATCGACGTGAGCTGACCGAACGATGGGG-CGCT 17319 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 || ||| | |||| | |||||| ||| | ||| || || || || || ||||| | Sbjct 17318 CAGGTGCACATTCAAACTCTGGCTCTGGCACAC-AAACGCACCGCGGTCGGCAGCCATGT 17260 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGA 204082 || ||| ||| || || ||||| || |||||| ||| || || || ||| | Sbjct 17259 CGAGAATCACCTTTTGGCTGATTTCCCATACAGTCTTGTACAGCGCCT-TGATGTTGTCT 17201 Query 204083 GGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTC 204141 || | | | | || | |||| |||||||| || || || | || | || || Sbjct 17200 GGGATACCGGGC-ACATTCTGAATCGAGCCGCCGTGCGCAATAATCTTCTGCTTCATCGA 17142 Query 204142 CTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAA 204201 ||| ||||| ||||| | || || || |||| ||| ||||| | || ||| || Sbjct 17141 CTCGTTCCACAGGCCCAGCTCGACCAATTCACGCAACAGCCACGGGTTCACGACCTGGAA 17082 Query 204202 GTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTT 204261 || |||| ||||| | || || | | |||| | ||| | || || || |||||| Sbjct 17081 CTCACCGGCGAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGTT 17022 Query 204262 GTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCG 204321 ||| | |||||| || ||| || ||||| || || || ||||| || || || Sbjct 17021 AAAGCCAAGGATCTGACTTGTCGAGGCGGTCGGCATCGGCGCAAGCAGCAGCGAATTCCG 16962 Query 204322 CACACCGTATTTTTGG--ACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379 || || || |||| | | || ||| || | |||||||| || || ||| Sbjct 16961 CAGGCC--ATGCTTGGCAATCTTGGCCTTGAGGGCCGTCCAGTCCCACAGATCAGAGGGC 16904 Query 204380 TTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTC 204439 | | ||||||||| |||| || ||||| || | | |||||||||| ||| ||| Sbjct 16903 GTGCGGTTCCACATGTCATACTGCAAAATGCCCTGCGAGGCCGGGCTGCCCTCGTATGTC 16844 Query 204440 GGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATG-GCGTGATAGTACA 204497 || | || | | || || || |||| ||||||| || || | ||| | ||| | Sbjct 16843 TCGTACGTGCCG-TACTGCTCAGCGAGCTCGCACGAG-CGCTCAAGCGCGGCGTGGTAAA 16786 Query 204498 TGGTCTCAAAGATCTGAACGTT 204519 | |||||||||||||| || || Sbjct 16785 TCGTCTCAAAGATCTGCACATT 16764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154305450400