Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq83 129 1e-24 seq20 129 1e-24 seq40 105 2e-17 >seq83 Length=398874 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || ||||| |||||||||||||||| ||||||||| | || | || || Sbjct 62314 AGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCC 62373 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || |||||||| |||||||| ||||||||| ||| || || ||| Sbjct 62374 TCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 62433 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | |||||||||| Sbjct 62434 TGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTC 62493 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 62494 TTGCCAGTCAGGGTCTTGACGAAGATTTG 62522 >seq20 Length=159509 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || || | ||||| Sbjct 51394 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 51335 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| |||||||| ||||||||| ||| || || ||| Sbjct 51334 TCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 51275 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | ||||||||| Sbjct 51274 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 51215 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| | || || || || | ||| Sbjct 51214 TTACCCGTCAAGGTCTTGACGAACACTTG 51186 >seq40 Length=632444 Score = 105 bits (116), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| |||||||| | ||||| ||||| |||| ||||||||| || || | ||||| Sbjct 154304 CAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 154245 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || || ||||| || ||||| ||||| ||| ||| || || || Sbjct 154244 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTC 154185 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | ||||| | | || || || | ||||| || Sbjct 154184 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGT 154125 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || |||||||| || || |||||| Sbjct 154124 TTTGCCTGTCAGGGTCTTCACAAAGATCTG---CATTTT 154089 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| | ||||| ||||| |||| ||||||||| || || | ||||| Sbjct 154531 AGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 154472 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || ||||| ||||| || ||| || || ||| Sbjct 154471 TCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCC 154412 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | || || || | ||||| || Sbjct 154411 TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTT 154352 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || Sbjct 154351 TTGCCTGTCAGGGTCTTGACGAAAATCTG 154323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920240556030