Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq20 152 1e-31 seq40 149 1e-30 seq83 125 2e-23 >seq20 Length=159509 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||| || || | ||||| || Sbjct 51391 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCC 51332 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || |||||||| |||||||| || || ||||| || Sbjct 51331 AGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 51272 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || ||||| || ||||| ||| ||||| || ||||| | |||||| Sbjct 51271 ATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 51212 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || |||||||||||||| Sbjct 51211 CCCGTCAAGGTCTTGACGAACACTTGCAT 51183 >seq40 Length=632444 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||||||||| | || || || || || || ||||| ||| || || | ||||| Sbjct 154304 CAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 154245 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| || ||||| || || |||||||| ||||||||||| || ||||| Sbjct 154244 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGAATGCCCTCCTTGTC 154185 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| ||||| ||||||||| || ||||||||||| | || Sbjct 154184 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGT 154125 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || ||||||| || || || || | ||||||| Sbjct 154124 TTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTT 154090 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| | || || || || || || ||||| ||| || || | ||||| || Sbjct 154528 ACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCC 154469 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || |||||||| || |||||||| || ||||| || Sbjct 154468 AGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGG 154409 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| ||||||||| || ||||||||||| | || || Sbjct 154408 ATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCAAGGGTGATGGTTTTG 154349 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || || ||||| | ||||| Sbjct 154348 CCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||| ||||| || ||||| ||| || || | || || || Sbjct 62317 ACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCC 62376 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| || |||||||| |||||||| || || ||||| || Sbjct 62377 AGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 62436 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || || || | |||||| Sbjct 62437 ATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTG 62496 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 62497 CCAGTCAGGGTCTTGACGAAGATTTGCAT 62525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480320629030