Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 1e-13 seq83 87.8 1e-12 >seq20 Length=159509 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || ||||| ||| || || || ||||| || || | || Sbjct 51400 AGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGG 51341 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||||||||||||||| ||||| |||||||| |||| |||| |||||| Sbjct 51340 CCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCC 51281 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||| | || Sbjct 51280 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTG 51221 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||||||| || || || || | ||||| Sbjct 51220 ATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 >seq83 Length=398874 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 ||| | ||| | ||| ||||| ||| ||||| || ||||| || || | || | Sbjct 62310 CCGAAGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCC 62369 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 ||| |||| ||||||||| || || || || |||||||| |||| |||| |||||||| Sbjct 62370 GTCCTCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTT 62429 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| ||||| || ||| | | | || |||| ||| ||||| | ||| || Sbjct 62430 GTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGAT 62489 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || |||| || || || || || ||||| Sbjct 62490 CGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 62525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937182159070