Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq45 190 2e-42 seq90 131 2e-24 seq18 102 1e-15 seq40 87.8 2e-11 >seq45 Length=36469 Score = 190 bits (210), Expect = 2e-42 Identities = 200/261 (77%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 |||||||||||||| ||||||| ||| || ||||| ||||||||||| | ||||| || Sbjct 16036 TGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTT--AC 15979 Query 1630126 T--CGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGC 1630183 | | ||||| ||||| || | || | ||| | || || | || || | | | Sbjct 15978 TGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGAC 15919 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 | ||||||||||||| ||| ||||| | || || ||||| ||||||||||| |||| Sbjct 15918 CAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCT 15859 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 ||||||||||| |||||||| |||||| ||||||||||| ||||||| | || ||| | Sbjct 15858 CGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGCGTAC 15799 Query 1630304 CGGCGTTGAAGAGCGTGGGCG 1630324 | |||||||| |||||||||| Sbjct 15798 CAGCGTTGAACAGCGTGGGCG 15778 Score = 154 bits (170), Expect = 2e-31 Identities = 229/322 (71%), Gaps = 7/322 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||||||||||| |||||||||||||| | |||||| | ||||| || Sbjct 2802 GCCTTGGCATAGTCGCCCACGCGGCGCTCGAAAAAGTTCGACTTGCCTTGCAGCGAAATA 2861 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || ||||| | || | ||||||||| ||| || |||| | | Sbjct 2862 TTCTCCATAAAGTCAAAGGGGTTCGTCGAGTGGTAGTGCTTCGGGCAGCCCAGCGCCACC 2921 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| || ||||| || |||||||||||||| |||| || ||||| || ||| Sbjct 2922 AGCAGGCGGTCCGCCACAAATTCAATGTACTGGCACATCAGGCGCGCATTCATACCAATG 2981 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 |||| || ||||| | || || ||| || | ||| || | || ||||| ||| Sbjct 2982 AGCGAGACGGGCAGGGCATCCGACAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTGATA 3041 Query 868931 ATCTGCCTGGGCACGTCGG---CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 || | | | ||||| |||| |||| || | | | || | |||||||| Sbjct 3042 ATGCGGTTCACCGTGTCGGGGTGCGAGCGCTTCTTCAGGTG---GCTGAACAGCAGGCAC 3098 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 ||||||||| ||||| ||||| Sbjct 3099 GCAAAGTCGGTGTGCAGACCCT 3120 Score = 143 bits (158), Expect = 3e-28 Identities = 207/290 (71%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||| ||||||||| | |||| | | | | Sbjct 3397 CCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGCCTCGGTCGCCT 3456 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| | |||| || | | || |||||| ||| || || || || |||| Sbjct 3457 GGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATCCGACGCAGCGA 3516 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 |||| ||||| || || | | |||||| ||||| |||| | | ||| |||||| Sbjct 3517 AAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCGGTTGTCCCAGT 3576 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 |||| ||||| | ||||||||||||||||| ||| ||||||||||| | Sbjct 3577 CATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCT 3636 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGG 869917 ||||||||| ||| | | |||||||| || |||||||| ||||| ||| Sbjct 3637 TGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAAACGG 3686 Score = 118 bits (130), Expect = 1e-20 Identities = 181/255 (71%), Gaps = 15/255 (6%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || ||||||||||| || |||||||||||||| ||||| | | ||| ||||||||| Sbjct 3153 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAG 3212 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||||||||| ||||| |||||| | | || ||||| | || |||||| | | Sbjct 3213 AAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTCCGAGAA-----CGAGGCAC-GC 3266 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCG 869392 |||| |||||| | |||||| |||||||| ||| |||| || | ||| || Sbjct 3267 TTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGAATCGTCTCA 3326 Query 869393 ATGGCGCGAAAGAGGTGGTC---CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGG 869449 |||||| || ||| | | || ||| || || || || ||||| |||||| Sbjct 3327 ATGGCGTTGAACAGGAAGGCGCGCTGCTCG---GGCTCGCGGATGTACGTGTCAATCAGG 3383 Query 869450 AGCGAATAGGTCTCC 869464 |||||||| |||||| Sbjct 3384 AGCGAATACGTCTCC 3398 Score = 93.3 bits (102), Expect = 5e-13 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 1627787 CGTGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACG 1627846 ||||||| | |||||||||||| | || ||||| || || | ||| || | | Sbjct 16794 CGTGGTAAATCGTCTCAAAGATCTGCACATTCAGGCGGCGAGCCTCTTGGCTGTCAAAGG 16735 Query 1627847 GCAGGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGT 1627906 | | |||| || ||| | ||||| ||||||||||| || | || || || |||| Sbjct 16734 GGTAGCCCATGATCATAAAGGCATCGGCTAGGCCCTGCACACCAATACCAATAGGACGGT 16675 Query 1627907 GGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGT 1627966 ||||| ||| ||| |||| || ||| || ||||| | |||||| ||||| | ||||| Sbjct 16674 TGCGCATGTTGGAGCGGCGCGCGCTGGGGACGGGGTAATAGTTGATATCGATAATGCGGT 16615 Query 1627967 TGAGG---TTGCCCACCACGACCTGGACGATCTCGTGCAGG 1628004 | ||| |||| |||||| | ||||| | || |||||| Sbjct 16614 TCAGGTTCTTGCACACCAC--CTTGGAC-ACGTCATGCAGG 16577 >seq90 Length=229276 Score = 131 bits (144), Expect = 2e-24 Identities = 246/358 (69%), Gaps = 4/358 (1%) Strand=Plus/Plus Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960 ||| |||| || || || |||||| | || || |||| || ||| |||||| || Sbjct 88561 GCCGGGCATTGGAAAAACGACGAGCGTGCATTGCCTTGCGCATGCGCTCCTGGGCGATGC 88620 Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020 | | ||||| || ||||| || ||||| || ||||| |||||| | ||||||||||| Sbjct 88621 GTACAAGGAGGCTGTTCTCGAGCTGAACGCCTCAGACGACCGCGGCATTGACGTCGTGCG 88680 Query 1574021 CAAGATCATCAAGCACCACGC-CTCCAAGAGGA-TCGACCTGCCGCCCGGACGCCACAAG 1574078 ||| | |||||| || | || ||| ||| |||||||| || || |||||| Sbjct 88681 CAACAAAATCAAGGCATTTGCGCAGAAAAAGGTGTCG--CTGCCGCCGGGGCGGCACAAG 88738 Query 1574079 GTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCC 1574138 | || | || |||||||| ||| || | ||| | | || |||||||||||||| Sbjct 88739 ATCATTGTGCTGGACGAGGCGGACAGCATGACGCCCGGTGCGCAGCAGGCCCTGCGCCGA 88798 Query 1574139 ACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATG 1574198 || ||||| | | | | ||||||||||| | || || ||| |||| | | Sbjct 88799 ACGATGGAGATTTATGCGCAAACGACGCGCTTCTGTTTTGCATGTAACCAGTCGAACAAG 88858 Query 1574199 GTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACG 1574256 | |||||| | | || ||||| || || |||||||| |||| ||| || |||||| Sbjct 88859 ATTATCGAGCCGATTCAGAGTCGGTGTGCGATTCTGCGGTTTGGACGCGTGAGTGACG 88916 >seq18 Length=1036329 Score = 102 bits (112), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 1254366 ATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGC 1254425 ||||| ||||| | ||||||||||| |||| ||||||| | |||||| || Sbjct 150287 ATCAGACGCACCGACGTCTGGATCTCACGCGACGAGATCGTGCTCTTCTTGTTGTAGCTG 150346 Query 1254426 GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1254485 || || |||||| | | | ||||| |||| || || | || |||||||||| Sbjct 150347 GCAAGCTTCGAGGCCTCCGAGGCAATGCGCTCGAAAATATCCTGCACGAACGAGTTCAGA 150406 Query 1254486 ACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAG 1254545 | | ||| | |||||| ||||| ||| ||| |||||||||||||| ||||| |||| Sbjct 150407 ATAGCCATGGCCTTGTTCGAGATACCCGTGTCAGGGTGCACCTGCTTAAGCACACGGTAG 150466 Query 1254546 ATGAACGACGAGTACG 1254561 ||| | | |||||||| Sbjct 150467 ATGTAGGTCGAGTACG 150482 >seq40 Length=632444 Score = 87.8 bits (96), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 19039 GCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGC 19097 ||||||| ||| || |||||||| || ||||| || ||||| ||||| | || Sbjct 382739 GCCAAGAACGACTCTATAGGCGGCACAGTAACGTGTGTTATCCGCAATGTGCCCGTCGGA 382798 Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 || || |||||||| ||||||||||| || || | ||||| |||||| || || Sbjct 382799 CTTGGTGAGCCGTGTTTTGACAAGATGGAATCCAAAATTGCCCAGGCCATGATGAGTATA 382858 Query 19158 CCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 || ||||||||||| | ||||||||| ||| || Sbjct 382859 CCCGCCACCAAGGGTATTGAGATTGGCTCCGGATT 382893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131814178530