Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-12 seq43 87.8 1e-11 >seq18 Length=1036329 Score = 91.5 bits (100), Expect = 1e-12 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 || |||||||||| ||| || || || |||||| | || | | || || || ||| Sbjct 574904 GTACCACCACCCAGATCGAAGATGAGCACATTCTTCTCAGCGCTGTCCTTCTTGTCGAGA 574963 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| |||||||| || || || ||||| || | || ||||| ||||||||| Sbjct 574964 CCGTAGGCAATGGCAGCAGCCGTAGGCTCGTTAATGATACGCATCACATTGAGACCAGCA 575023 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| || || || || | || || ||||| || || ||||| || || Sbjct 575024 ATGACACCGGCATCCTTGGTAGCCTGACGCTGCGAGTCGTTGAAGTAAGCAGGCACCGTG 575083 Query 282464 ATAACGGCATCTGTTACTTC 282483 | || || || | ||||| Sbjct 575084 ACGACAGCGTCCTTCACTTC 575103 >seq43 Length=39331 Score = 87.8 bits (96), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| ||| ||||| |||||| | | || || |||||||| |||||||| || | || Sbjct 21296 TTGAAAGGAAAAGAGGGTCGTTTGCGTGGTAACTTGATGGGTAAGCGTGTTGACTTTTCG 21355 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 || || ||||||||||| ||||||||| |||| || || |||||||||| || Sbjct 21356 GCCCGAACAGTTATTACGGGTGATCCTAACATTGAACTTGATCAAGTTGGTGTCCC 21411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740625981380340