Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq45 93.3 1e-13 >seq45 Length=36469 Score = 93.3 bits (102), Expect = 1e-13 Identities = 449/703 (64%), Gaps = 21/703 (3%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||| ||| || ||||| || || || ||| | || | || || |||||||| || | Sbjct 15604 ACTTTTTCGGATTCAAGACCCTGGAGCGTTCATACCTGCTGCGCATCAATGGCAAGGTGG 15663 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||| || ||||| |||||| || | ||||| || | |||||||| || | || ||| Sbjct 15664 CTGAGCGGCCTCAGCACATGCTTATGCGTGTGGCTGTAGGTATTCACGGCGAAGACATTG 15723 Query 110422 A-AGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT---CATGCTACT 110477 | ||| | ||||| || | | | ||||| ||| || || || | Sbjct 15724 AGAGC-GCGATTGAGACCTACAACTACATGTCTGAAAAG---GCTTTTACGCACGCATCG 15779 Query 110478 CCTACCCTATTTAACGCAGGAACT---AATGGAGGACAATTGGCTTCTTGCTTTCTTCTA 110534 || || || || ||||| || || ||| ||| || | || ||||| || | Sbjct 15780 CCCACGCTGTTCAACGCTGGTACGCCGAATCCG---CAAATGTCGTCGTGCTTCCTCGTG 15836 Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATT 110594 | || || || || || || || ||||| || || | || || |||| | || Sbjct 15837 AGCATGAAGGACGACTCGATCGAGGGTATCTACGACACACTCAAGACCTGTGCTATGATC 15896 Query 110595 TCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAAT 110654 || || | | || || |||||| | || ||||| |||| || | | ||| | || Sbjct 15897 TCAAAGACGGCCGGCGGCATTGGTCTGAACATTCATAATATCCGTGCTACAGGCTCGTAT 15956 Query 110655 ATCGCAACAGCGAAGGGTG-CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713 || || |||| |||| | ||| | | |||| || ||| | | || |||||| | Sbjct 15957 ATTGCCGGCACGAACGGTGTCAGTAACGGTA-TTGTGCCCATGCTTCGCGTATTCAACAA 16015 Query 110714 CACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCT 110770 ||| ||| || || | |||||||| || | | ||| ||||||| ||||| || Sbjct 16016 CACGGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGCGCATTTGCCATCTACCT 16075 Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830 || || ||||| || ||| | ||||| || | || || || || || || || || Sbjct 16076 GGAGCCATGGCACTCGGATGTGTTTGAGTTTGTTGACCTGCGCAAGAACCACGGCAAAGA 16135 Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890 || | || ||||| | |||| || ||||| | | || || || ||||| || Sbjct 16136 CGAGGTGCGTGCTCGTGACCTGTTTTTGGCCTTGTGGGTCCCCGACTTGTTTATGAAGCG 16195 Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTG 110949 |||| | | || | ||||| ||||||||||| | || | ||||| || |||| Sbjct 16196 TGTTGAGAAGAACGAAGACTGGTCGCTTATGTGTCC-CGCCGAAGCACCTGGCCTTTCTG 16254 Query 110950 ATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGA 110992 | ||||| |||||||||| | || |||||||| || || Sbjct 16255 ACTGCTATGGCGAAGAGTTTGAGCAGCTGTACGAAAAGTACGA 16297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811431456490