Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq45 241 2e-57 seq90 136 6e-26 seq18 96.9 5e-14 seq23 87.8 3e-11 >seq45 Length=36469 Score = 241 bits (266), Expect = 2e-57 Identities = 388/545 (71%), Gaps = 22/545 (4%) Strand=Plus/Minus Query 1455742 CCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCG 1455801 ||| ||||| || ||||| || |||||||| ||| ||| | |||||| || ||||||| Sbjct 3686 CCGTTTTGTGCTCTTCCCGATTCGCTACCACGAGATCTGGCAGATGTAC-AAGAAGGCCG 3628 Query 1455802 AGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGACACGGTCCACTGGGTG 1455860 |||| || || ||||||||||||||| | ||||| | || |||| | |||||| Sbjct 3627 AGGCGTCGTTCTGGACCGCCGAGGAGATTGACCT-GTCGAACGACCTGAATGACTGGGAC 3569 Query 1455861 T--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGC 1455917 ||| ||| |||| ||||| || || | | || || || |||||||| ||| || Sbjct 3568 AACCGCATGACGGACGGTGAGCGTCACTTTGTGAGCCATGTGCTGGCCTTTTT-CGCTGC 3510 Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCC 1455977 ||||| || ||| |||||| || | | ||||| | | |||||||| | | Sbjct 3509 GTCGGATGGTATTGTGAACGAGAATCTCGTGGAGCGCTTCAGCACCGAGGTCCAGGCGAC 3450 Query 1455978 AGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 ||||| || | |||||||| ||||||||| || || ||||||||||| || || || Sbjct 3449 CGAGGCTCGCTGCTTTTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACGTA 3390 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG---GACCACCTCTTTCG 1456094 ||||||||||| ||||| ||| || || || |||| || | | ||| || Sbjct 3389 TTCGCTCCTGATTGACACGTACATCCGCGAGCC---CGAGCAGCGCGCCTTCCTGTTCAA 3333 Query 1456095 CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC-- 1456152 |||||| || ||| | || |||| ||| |||||||| |||||| | |||||| Sbjct 3332 CGCCATTGAGACGATTCCTGTTGTGAAGAAGAAGGCCGAGTGGGCGCTTCGCTGGATCTC 3273 Query 1456153 -AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGC 1456210 |||| | | |||||| || | ||||| || || | |||||| | ||| |||||| Sbjct 3272 GGACAA-GCGTGCCTCG----TTCTCGGAGCGCCTTGTGGCCTTTGCGGCCGTAGAGGGC 3218 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 ||||| ||||||||| ||| | | ||||| |||||||||||||| || ||||||||| Sbjct 3217 ATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCC 3158 Query 1456271 GGTCT 1456275 ||||| Sbjct 3157 GGTCT 3153 Score = 178 bits (196), Expect = 2e-38 Identities = 197/261 (75%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||||||||| || || || || |||||| ||||| | ||||||||||| || || Sbjct 15778 CGCCCACGCTGTTCAACGCTGGTACGCCGAATCCGCAAATGTCGTCGTGCTTCCTCGTGA 15837 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 |||||||| ||| ||||||||||| ||||| ||||| |||||| || || | |||| Sbjct 15838 GCATGAAGGACGACTCGATCGAGGGTATCTACGACACACTCAAGACCTGTGCTATGATCT 15897 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 | ||| ||||||||||||| ||| | | || || | || || | ||| | || Sbjct 15898 CAAAGACGGCCGGCGGCATTGGTCTGAACATTCATAATATCCGTGCTACAGGCTCGTATA 15957 Query 260103 TGGCGGGCACCAACG--GCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || ||||| |||| | |||| ||||| ||||||||||||||||||| || ||| | Sbjct 15958 TTGCCGGCACGAACGGTGTCAGT--AACGGTATTGTGCCCATGCTTCGCGTATTCAACAA 16015 Query 260161 CACGGCGCGCTACGTCGACCA 260181 |||||| |||||||||||||| Sbjct 16016 CACGGCACGCTACGTCGACCA 16036 Score = 149 bits (164), Expect = 9e-30 Identities = 158/203 (78%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 ||||| || ||||||| || ||||| || | || ||||||||||||||||||||| | Sbjct 2995 CTGCCCGTCTCGCTCATTGGTATGAATGCGCGC-CTGATGTGCCAGTACATTGAATTT-G 2938 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 | || ||||||||||| | |||||| |||||| ||||||||||| || | ||||| Sbjct 2937 TGGCGGACCGCCTGCTGGTGGCGCTGGGCTGCCC-GAAGCACTACCACTCGACGAACCCC 2879 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 || | |||||| || ||||| | |||||| | |||||||||||||||||||| Sbjct 2878 TTTGACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGAGCGCCGCGTG 2819 Query 1456750 GGCGAGTACGCCAAGGCCGGCGT 1456772 ||||| || ||||||||||| || Sbjct 2818 GGCGACTATGCCAAGGCCGGTGT 2796 >seq90 Length=229276 Score = 136 bits (150), Expect = 6e-26 Identities = 265/389 (68%), Gaps = 2/389 (1%) Strand=Plus/Minus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 ||||| | | ||| |||| ||||| || ||||| || ||||| | | |||||| | | Sbjct 88916 CGTCACTCACGCGTCCAAACCGCAGAATCGCACACCGACTCTGAATCGGCTCGATAATCT 88857 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | |||| ||| || || | || |||||||| | | || | ||||| || Sbjct 88856 TGTTCGACTGGTTACATGCAAAACAGAAGCGCGTCGTTTGCGCATAAATCTCCATCGTTC 88797 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || |||||||| || || | ||||| | || ||| |||||||| || | ||||||| Sbjct 88796 GGCGCAGGGCCTGCTGCGCACCGGGCGTCATGCTGTCCGCCTCGTCCAGCACAATGATCT 88737 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095 |||| ||||| ||||||| ||| ||||| || ||||| | ||||||| Sbjct 88736 TGTGCCGCCCCGGCGGCAGCGACACCTTTTTCTGCGCAAATGCCTTGATTTTGTTGCGCA 88677 Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCG 333155 ||||||| | |||||| ||||| || ||||| || ||||| || ||||| | | || Sbjct 88676 CGACGTCAATGCCGCGGTCGTCTGAGGCGTTCAGCTCGAGAACAGCCTCCTTGTACGCAT 88617 Query 333156 CACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGAC 333215 | |||| ||| | |||| ||||| | |||||| || || || |||| ||| | Sbjct 88616 CGCCCAGGAGCGCATGCGCAAGGCAATGCACGCTCGTCGTTTTTCCAATGCCCGGCATGC 88557 Query 333216 CCGCCAGCAAGAGGT-TGGGCATGTTGCC 333243 | | || | ||||| ||||| |||||| Sbjct 88556 CAGACACGAGGAGGTGCGGGCA-GTTGCC 88529 >seq18 Length=1036329 Score = 96.9 bits (106), Expect = 5e-14 Identities = 162/231 (70%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 724897 CGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCAT 724956 |||||||| ||| |||||| ||||| |||||||||||||| || | | || Sbjct 150482 CGTACTCGACCTACATCTACCGTGTGCTTAAGCAGGTGCACCCTGACACGGGT-----AT 150428 Query 724957 CCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG 725016 | || |||||| ||||| | || |||||||||| || | || || |||| ||||| | Sbjct 150427 C-TCGAACAAGGCCATGGCTATTCTGAACTCGTTCGTGCAGGATATTTTCGAGCGCATTG 150369 Query 725017 GCACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGA 725074 | | |||||| ||| || || ||| ||||||| | ||||||| |||| || Sbjct 150368 CCTCGGAGGCC--TCGAAGCTTGCCAGCTACAACAAGAAGAGCACGATCTCGTCGCGTGA 150311 Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGC 725125 ||||||||| | ||||| ||||| | | ||| || || | | |||||| Sbjct 150310 GATCCAGACGTCGGTGCGTCTGATTCTCCCCGGTGAGCTCTCGAAGCACGC 150260 >seq23 Length=135516 Score = 87.8 bits (96), Expect = 3e-11 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| || | |||| ||| |||| ||| |||||||| ||| |||||| || Sbjct 7988 CTCCATCTCGCCGAACCGGATGCCACCCGCACGCTTGCGGCCCTTGACGGGCTGCCGCGT 8047 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGT-CGGGCGTGAATCTTGTCGATGGCCACGTGGCGCA 1600376 ||| |||||||||||| || || ||| | || | ||||||| || ||| ||| || | Sbjct 8048 GAGGGCGTGGACGGGGCCG-GTCGTGCGGACCTGGAACTTGTCGTTGACCATGTGTCGGA 8106 Query 1600377 GGGCCTGGTAGTAGACCGGCGCCG 1600400 || ||||||||| | || ||||| Sbjct 8107 GGCGCTGGTAGTACA-CGACGCCG 8129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177802519334580