Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq40 113 4e-20 seq83 109 5e-19 seq20 95.1 1e-14 seq27 84.2 2e-11 >seq40 Length=632444 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| |||| || | || || || || || || || || |||||||||||| Sbjct 154318 CCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154259 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || ||||| ||||| || | || || |||||||| || || || Sbjct 154258 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGA 154199 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | | || ||| Sbjct 154198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154139 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | |||||| ||||| || ||||||||||| ||||| Sbjct 154138 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 154092 Score = 105 bits (116), Expect = 6e-18 Identities = 165/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||| || |||||||| || | || | || || || || || || || || ||||| Sbjct 154553 TTATTGTCCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTA 154494 Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 |||||||| | |||| | || || ||||| ||||| || | || || |||||||| || Sbjct 154493 GTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTC 154434 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 || || | ||||| || || ||||||| || | | | || | ||||| | | Sbjct 154433 AGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGA 154374 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || || || | |||||| ||||| || || || || || |||||| Sbjct 154373 CTCGACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCATA 154319 >seq83 Length=398874 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 27031 ACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCT 27090 |||| | || | ||| | ||| || || ||||| || ||||||||||| | | || Sbjct 62309 ACCGAAGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGC 62368 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||| || ||||| ||||| ||| | || ||||||||||| ||||| || | |||||| | Sbjct 62369 CGTCCTCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCT 62428 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || ||||||| |||| | || | ||||| | | || || || || || | Sbjct 62429 TGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGA 62488 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250 | | ||||| ||||| || || || ||||||||||| || Sbjct 62489 TCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCATGGC 62528 >seq20 Length=159509 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| || | ||| || || || || || |||||||||||| Sbjct 51409 CCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 51350 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| |||||||| | || ||||||||||| ||||| || Sbjct 51349 AGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 51290 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||||| |||| | || | ||||| | | || || Sbjct 51289 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 51230 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||||| || || || || | |||||| Sbjct 51229 TCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 >seq27 Length=111450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| |||| | | | ||| | ||| || |||||||| || | ||||||||| Sbjct 8656 GCCACCACGCAGACGCAGTTCGAGATGCAGCGTCGATTCTTTTTGGATCTGGTAGTCGCT 8715 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || |||| ||||||||||||| || ||||| | | || ||||| | ||| || || Sbjct 8716 CAGCGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGAGAAGGCGCTGCTCATCGGGGGG 8775 Query 27140 CACACCCTCTTTATCGGCGATCTTG---TTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 | |||| ||| || | ||| ||| || | || || || |||| |||| Sbjct 8776 GATGCCCTGCTTA-CGCTGGATTTGAGCCTTTACATG--ATCCACGGTATCTGACTCTTC 8832 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || ||||| ||||| || ||||| ||||| || ||||| Sbjct 8833 GACGTCCAGCGTGATAGAGGAGCCCGAGAGTGTTTTGACAAAAATCTGCAT 8883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933933900080