Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq18 208 2e-48 seq40 125 2e-23 seq24 96.9 1e-14 >seq18 Length=1036329 Score = 208 bits (230), Expect = 2e-48 Identities = 930/1460 (64%), Gaps = 21/1460 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||| | ||||| || || |||||||| ||||| ||||| || || ||| Sbjct 575499 GCTGTTGGTATTGATCTGGGTACCACCTACTCTTGTGTGGCTGTCTGGCAGAACGACCGT 575440 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || ||||| || ||||| | || || Sbjct 575439 GTTGAGGTCATTGCCAACGACCAGGGTAACCGCACGACGCCGTCGTACGTGGGTTTCACG 575380 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | || || || | || Sbjct 575379 GACACCGAGCGTTTGATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCGCATAAC 575320 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || || || ||||| || ||||| | | || || ||| | || || Sbjct 575319 ACTGTGTTCGACGCCAAGCGTCTCATTGGCCGCAAGTTCTCGGACGCTGATGTGCAGTCG 575260 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTATT 349495 || | || || | || || | ||||| ||| | || || ||| | || Sbjct 575259 GACATGAAGCACTGGCCATTCGCCGTTGTG------GACCGCTCTGGCAAGCCAGTCATC 575206 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGG 349553 |||| ||||| || ||||| |||| || || || | || ||||| || || |||| Sbjct 575205 AAGGTCGAATACAAGGGTGAGGAAAAG--ATCTTCACGCCTGAGGAAATCTCTTCCATGG 575148 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | | | || ||| || | ||||| || || | |||| ||| | || |||| Sbjct 575147 TCCTCTTGAAGATGCGTGAGACTGCTGCTGCCTACCTCGGTGGTGAAGTGAAGGACGCTG 575088 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | | || || || || || || || || | |||||| || || || ||||| || Sbjct 575087 TCGTCACGGTGCCTGCTTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCCGGTG 575028 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 |||||| || | ||||| | | || ||||| || || || ||||| || ||||| | Sbjct 575027 TCATTGCTGGTCTCAATGTGATGCGTATCATTAACGAGCCTACGGCTGCTGCCATTGCCT 574968 Query 349734 ATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 | || || || || || || | | || || ||| | || || || ||| | |||||| Sbjct 574967 ACGGTCTCGACAAGAAGGACAGCGCT-GAGAAGAATGTGCTCATCTTCGATCTGGGTGGT 574909 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || |||||||| || || || |||| ||||| || || || || || || || Sbjct 574908 GGTACGTTCGATGTATCCCTGCTCACGATTGAGGAGGGTATCTTCGAGGTCAAGGCCACC 574849 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || |||||||| ||||| ||||| || || ||||| || || || Sbjct 574848 GCCGGTGACACGCACCTTGGTGGTGAAGACTTTGACAACCGCCTCGTGAACCACTTCGTC 574789 Query 349913 AAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 | || || ||||| |||| || | ||| || || | | || | ||||| Sbjct 574788 CAGGAGTTCAAGCG-CAAGAACAAGAAGGATCTTACGACGAACGCCCGTGCTCTCCGTCG 574730 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || | || ||||| ||||| | | || || | | || ||| | || Sbjct 574729 TCTTCGTACCGCTTCGGAGCGTGCCAAGCGCACTCTGTCGTCGGCCGCTCAGACCACGAT 574670 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||||||||| || || || || | || |||| | || || || ||||| || || Sbjct 574669 TGAAATTGACTCGCTCTTCGAGGGTATCGACTTCTACACCTCGATCACTCGTGCCCGTTT 574610 Query 350092 TGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 || || | || || || || | | | || || || || || || || || | Sbjct 574609 CGAGGAGCTCTGCGGTGACCTCTTCTCGCAC-ACGATTGACCCAGTCGAGAAGGTGCTCC 574551 Query 350151 AAGATGCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || || || || | | | || | | | || | || | ||||||||||| || Sbjct 574550 GCGACGCTAAGATCGACAAGGGCTCCG-TGAACGAGATTGTGCTCGTTGGTGGTTCGACC 574492 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269 |||||||| || || || | || || || || || ||| || ||| | Sbjct 574491 CGTATTCCTCGCGTGCAGAAGCTGCTGCGCGACTTCTTCAACGGCCGCGAGCCTAACAAG 574432 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 || || || || ||||| |||||||| || |||||||| || ||||| | ||| | | Sbjct 574431 TCGATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCCGCCATTCTGACG 574372 Query 350330 GGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389 || | | | || | | || || | || || ||||| |||| || || | Sbjct 574371 GGTGACACGTCGGAGAAGACGCAGGACCTTCTTCTTCTTGATGTTGCTCCTCTCTCTATG 574312 Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 || | || || |||||| || | || || || | || | || || || Sbjct 574311 GGTATTGAGACCGCTGGTGGTGTGTTCACGCCGCTCATCAAGCGTAACACGACCGTGCCG 574252 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 || || ||||| | || || |||| ||||| || ||||| | || || ||| Sbjct 574251 ACCAAGAAGTCGGAGGTCTTCTCGACATACGCAGACAACCAGCCTGGTGTGTTGATCCAA 574192 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || | || ||||| ||||||||||| || || || || || || | || || Sbjct 574191 GTGTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGTAAGTTCGAGCTC 574132 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 || || || || |||| | || ||||||||||| || ||| | |||||| | || Sbjct 574131 TCTGGTATCCCCCCTGCGCCTCGCGGTGTTCCTCAGATCGAGGTCACCTTCGATGTCGAC 574072 Query 350630 TCAAATGGTATTTTAAATGT 350649 | || | |||||| || || Sbjct 574071 GCCAACGCTATTTTGAACGT 574052 >seq40 Length=632444 Score = 125 bits (138), Expect = 2e-23 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| || | |||||||| || | || || || || || || || || || Sbjct 154322 CATACCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTC 154263 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || ||||| || || || || ||||||||||| || || || || ||||| Sbjct 154262 GCTCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGG 154203 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || || || || || ||||||| || || | || Sbjct 154202 AGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTC 154143 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||||| || | || || || || || || || ||||| ||||||||| Sbjct 154142 GACTTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATT 154091 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 ||||| || || | ||| ||||| || | || || || || || || || || || Sbjct 154546 CCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154487 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| || || || || ||||||||||| || || || || ||||| ||| Sbjct 154486 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGA 154427 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || || ||||| || || || || || || ||||||| || || | || ||| Sbjct 154426 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154367 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || || || || || || || || ||||||||||| Sbjct 154366 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq24 Length=128936 Score = 96.9 bits (106), Expect = 1e-14 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTG-CTGTTTGGCAAAATGATCG 349257 || || || || || | ||||| || || || ||||||| ||| | | | || || || Sbjct 54767 GCCATTGGTATTGACCTTGGTACGACCTACTCGTGTGTTGGCTGGTGGACCAAC-GAGCG 54709 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 ||| || || ||||| || || || |||||| | || ||||| || ||||| || || || Sbjct 54708 TGTTGAGATCATTGCCAACGACCAGGGTAACCGCACGACGCCCTCGTACGTCGCTTTCAC 54649 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || | |||||| ||||||||||| | || || || || |||||| || || | Sbjct 54648 GGAGAACGAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGCTGCTATGAACCCTCGTCA 54589 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGG 349407 ||||| ||||| || ||||| || || || Sbjct 54588 GACGGTGTTTGACGCCAAGCGCCTGATCGG 54559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252652722270