Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq40 105 5e-18 >seq40 Length=632444 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || || ||||| ||||| || ||||| || || || Sbjct 154320 ATGCAGATTTTCGTCAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCTTCG 154379 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || || || ||| Sbjct 154380 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAA 154439 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| || || || ||||| || | ||||| | |||| |||||| Sbjct 154440 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTACAAC 154499 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || ||||| || | || || | ||||| || ||| Sbjct 154500 ATCCAGAAGGAATCGACATTGCACCTTGTGCTACGTTTGCGCGGTGGA 154547 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| || || ||||| ||||| || ||||| || || Sbjct 154089 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTTGAAGTCGAGTCT 154148 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||||||| |||| | | || || || ||||| || || | || || || Sbjct 154149 TCGGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGAC 154208 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 |||||||| | || ||||| || || || ||||| || | ||||| | |||| ||| Sbjct 154209 CAACAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 154268 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || || ||||| || | ||| | | ||||| || || Sbjct 154269 AACATCCAGAAGGAATCGACATTGCACCTTGTTCTGCGTTTGCGTGGCGG 154318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009229245720