Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq45 156 6e-33 >seq45 Length=36469 Score = 156 bits (172), Expect = 6e-33 Identities = 434/663 (65%), Gaps = 2/663 (0%) Strand=Plus/Minus Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATC 78029 || ||||| | |||||||| | | | || ||| || |||||||| | || || | | Sbjct 16231 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 16172 Query 78030 CATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGA 78089 || | || | ||| || || || | | || || || || ||||| || Sbjct 16171 CACAAGGCCAAAAACAGGTCACGAGCACGCACCTCGTCTTTGCCGTGGTTCTTGCGCAGG 16112 Query 78090 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT 78149 || | |||||| | | ||| || |||||||| || || || || || | | || || Sbjct 16111 TCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGG 16052 Query 78150 CGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGA 78209 || || || || || || || | || | || ||||| || | || | | ||| || Sbjct 16051 CGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGC 15992 Query 78210 ATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTA 78269 | |||||||||| || || || || | |||||| || | || || |||||| Sbjct 15991 ACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTA 15932 Query 78270 CTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTA 78329 |||| | || || || || ||| |||| || || | ||| || || | ||| Sbjct 15931 TGAATGTTCAGACCAATGCCGCCGGCCGTCTTTGAGATCATAGCACAGGTCTTGAGTGTG 15872 Query 78330 TCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 78389 |||||||||||||| || ||| ||| ||||| | | || || || |||||||| Sbjct 15871 TCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGC 15812 Query 78390 TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAA 78449 ||| || || || || || | || || ||||| |||||||| |||||||| Sbjct 15811 GGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGAC 15752 Query 78450 A-GTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508 | |||| ||||| || ||||| || || ||||| ||||| ||||| || || Sbjct 15751 ATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCAC 15693 Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568 |||||| | ||| |||||||| | ||| || ||| ||| || || || |||||| Sbjct 15692 ACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGA 15633 Query 78569 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAAC 78628 |||| || || || || ||| ||||||| |||||| | |||||||||||| | Sbjct 15632 ACGCTCCAGGGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGGTCGTAAATAATAGC 15573 Query 78629 AGA 78631 ||| Sbjct 15572 AGA 15570 Score = 132 bits (146), Expect = 7e-26 Identities = 357/545 (66%), Gaps = 6/545 (1%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || | ||||||||||| || ||||| || |||||||| || || | ||| Sbjct 3138 TCGTTCGAGAACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCG 3197 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| ||||| |||||||||||||| || ||| | ||| | | Sbjct 3198 AACGAGCCCGAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTCCGAGAAC 3257 Query 48303 CTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| |||| ||||| || | ||||| || ||||||||||| ||| ||| Sbjct 3258 GAGGCACGCTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGA 3317 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || || || || || || ||| | | | || | ||| || || Sbjct 3318 ATCGTCTCAATGGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCA 3377 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | || |||| | || ||||| || || ||||| ||||| || |||||||| Sbjct 3378 ATCAGGAGCGAATACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAG 3437 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | || || || ||| ||||| || | || || || | | |||||| || || Sbjct 3438 CAGCGAGCCTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACA 3497 Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 || ||||| ||||| ||||| || | ||||| | | ||| | || | Sbjct 3498 ATACCATCCGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCC 3557 Query 48600 GTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 |||| | || | ||||||||| | || || || | || | || || || ||||| Sbjct 3558 GTCATGCGGTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAG 3617 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716 || || ||||| || || || ||||| | ||| || || ||| | || ||||| | Sbjct 3618 AACGACGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGC 3677 Query 48717 ACAAA 48721 ||||| Sbjct 3678 ACAAA 3682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668018497600