Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq20 217 3e-51 seq40 185 2e-41 seq83 167 5e-36 seq18 91.5 3e-13 seq27 89.7 1e-12 >seq20 Length=159509 Score = 217 bits (240), Expect = 3e-51 Identities = 185/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| ||||| || | ||| || || |||||||||||||| Sbjct 51410 ACCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 51351 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||||||||||| ||| |||||||| || Sbjct 51350 CAGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGG 51291 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 51290 AATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 51231 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||||||||||||||| ||||| ||||| | ||||| Sbjct 51230 CTCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCAT 51183 >seq40 Length=632444 Score = 185 bits (204), Expect = 2e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||| || || || || || || || ||| || |||||||||||||| Sbjct 154319 ACCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCT 154260 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||||| || ||||||||| || Sbjct 154259 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGG 154200 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | || || |||||||||| ||||| Sbjct 154199 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 154140 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||| || ||||| || || || |||| ||||| || || |||||||||||| Sbjct 154139 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTTC 154088 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||| || || || || || || || ||| || |||||||||||||| Sbjct 154546 CCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154487 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || |||||||||| || ||||||||| ||| Sbjct 154486 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGA 154427 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | || || |||||||||| |||||| Sbjct 154426 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 154367 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || |||| ||||| ||||| |||||||| Sbjct 154366 TCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 >seq83 Length=398874 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||| | ||| || ||||||||||||||||| ||||| ||||| Sbjct 62311 CGAAGCACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCG 62370 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || ||||| | ||| |||||||| ||||||||||||||| Sbjct 62371 TCCTCCAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTG 62430 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| ||||| || | ||||| ||||| |||||| Sbjct 62431 TCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATC 62490 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||| ||||| ||||| || ||||| Sbjct 62491 GTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 62525 >seq18 Length=1036329 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 316975 TCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAAC 317034 || ||||||||||| || |||||||| || || || || || ||||| Sbjct 683713 TCTGATCCGTCGAGATCGTGCTCAACGTACCACGTGCGCACCTCTTCGGGCGAAGGGAAG 683772 Query 317035 CCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGG 317094 || || | |||||||||| || || | ||| || |||||||| || | ||| || | Sbjct 683773 CCCTCAACCTGACCGTTCTGGATGGCACGCATGAGCGTCGACTTACCCGAACCGTTACGA 683832 Query 317095 CCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGT---TGTTCAGAAGA 317151 || || ||||| || || | || ||| ||| | ||||| ||||||| ||| Sbjct 683833 CCACAGAGACCGTAGCGGTGGCCACGCTTAAGACGCA---GGGTGGCCGTGTTCAGCAGA 683889 Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||||| |||| || || || ||||||| ||| | ||||||||||||||| Sbjct 683890 ATCTTGGCACCGTAGGCAAGCGAGAACTGACAGTTACACAGGTCCTCGCC 683939 >seq27 Length=111450 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || ||| | ||||| | ||| |||||||||||| | |||||| Sbjct 8657 CCACCACGCAGACGCAGTTCGAGATGCAGCGTCGATTCTTTTTGGATCTGGTAGTCGCTC 8716 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| || || || || || |||||||||| | || || | || || Sbjct 8717 AGCGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGAGAAGGCGCTGCTCATCGGGGGGG 8776 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||| ||| ||||| | || ||||| ||| | || || || ||||||| Sbjct 8777 ATGCCCTGCTTACGCTGGATTTGAGCCTTTACATGATCCACGGTATCTGACTCTTCGACG 8836 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| | |||| | || || || || |||||||| Sbjct 8837 TCCAGCGTGATAGAGGAGCCCGAGAGTGTTTTGACAAAAATCTGCAT 8883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737992978860