Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264765.1_202015-08-11] 90 sequences; 7,249,850 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq20 145 7e-30 seq40 138 1e-27 seq83 132 4e-26 >seq20 Length=159509 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| |||||||| ||||||||| ||||| |||||| Sbjct 51409 CCACCACGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 51350 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| ||||| || ||||| ||||||||||||| ||| Sbjct 51349 AGCGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 51290 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 51289 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 51230 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| |||||||||| ||||| ||||| | |||||| Sbjct 51229 TCGAGGGTGATCGTCTTACCCGTCAAGGTCTTGACGAACACTTGCATG 51182 >seq40 Length=632444 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| | ||||| ||| || |||| || |||||||| ||||| |||||| Sbjct 154546 CCACCGCGCAAACGTAGCACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154487 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| || || || ||||||||||||||||| | |||| Sbjct 154486 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGA 154427 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | ||| | | | ||||| ||||| || Sbjct 154426 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 154368 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || ||||| ||||| |||||||||||||| Sbjct 154367 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTGACGAAAATCTGCAT 154320 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || | ||| | || || |||| || |||||||| ||||| |||||| Sbjct 154318 CCGCCACGCAAACGCAGAACAAGGTGCAATGTCGATTCCTTCTGGATGTTGTAGTCGCTC 154259 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| || || || ||||||||||||||||| | ||| Sbjct 154258 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCAGGAGGA 154199 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | ||| | | | ||||| ||||| || Sbjct 154198 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 154140 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || || ||||| || ||||| ||||| || || |||||||| || Sbjct 154139 TTCAAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 154089 >seq83 Length=398874 Score = 132 bits (146), Expect = 4e-26 Identities = 158/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| ||||| ||||| |||||| || ||||| |||||| ||| || || |||| || Sbjct 62316 CACGAGATGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 62375 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| || || ||||||||||||| |||| | |||||||||| Sbjct 62376 CAGCTGCTTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 62435 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| || | | | ||||| |||||| ||||| | ||| ||||| | Sbjct 62436 GATCTTGGCCTTC-ACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCT 62494 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||| ||||| ||||| || |||||| Sbjct 62495 TGCCAGTCAGGGTCTTGACGAAGATTTGCATG 62526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303479908000