Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq829 533 2e-146 seq579 158 1e-33 seq1241 147 2e-30 seq824 131 2e-25 seq708 123 3e-23 >seq829 Length=8684 Score = 533 bits (590), Expect = 2e-146 Identities = 648/869 (75%), Gaps = 13/869 (1%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| ||||| | | |||||||||||| | |||||||| | | || || Sbjct 4914 GAGCCGCTGCTGGTCGAGACCTCGCGCCGGTTCGTGCTGTTCCCCATCCGCTTCCACGAG 4973 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||||||||| |||||||||| ||||||| | |||||| Sbjct 4974 ATCTGGCAGATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCCGAGGAGATCGACCTG 5033 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| | ||||||||| | || |||||||||||||||| || ||||||| Sbjct 5034 TCCAAGGACCTGTACGACTGGGACCACCGCCTGAACGACAACGAGCGGCACTTCATCAGC 5093 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || ||||| ||||| || |||||| |||||||| || |||||||| ||||| ||||| Sbjct 5094 CATGTGCTCGCCTTCTTTGCCGCCTCGGACGGCATTGTGAACGAGAACCTGGTGGAGCGG 5153 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||||| |||||||||||||| |||||| || Sbjct 5154 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 5212 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | || ||| || |||||||| ||| | ||| | || Sbjct 5213 GGAGAACATCCACTCGGAGACCTACTCGCTGCTGATCGACACCTACATCCGCGAGCCCGA 5272 Query 116932 GGAGAAGCTCCGTT-TGTTGAACGCCATCGAGACGATGCC-GTGCGTCAAAGAGAAGGCC 116989 | || || | | | || ||| |||||||| || || ||| || || |||||| Sbjct 5273 GCAGC-GCGACTTCCTCTTTGGCGCGATCGAGACCATCCCCGTG-GTGAAGCGCAAGGCC 5330 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 ||||||||||||||||||||| || | | ||| ||| | ||||||||||||||| Sbjct 5331 GAGTGGGCGCTGCGCTGGATCAGCGACCGCCGTGCCATCTTTGCCGAGCGCCTGGTGGCG 5390 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| || || |||||| ||||||| |||||| ||||| |||| || ||||||||| Sbjct 5391 TTCGCCGCGGTGGAGGGCATCTTCTTCTCGGGCTCCTTCGCGTCCATCTTCTGGCTCAAG 5450 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || ||||| |||||||| || | ||| ||||||||||||||| | |||||||| Sbjct 5451 AAGCGTGGCCTGATGCCCGGTCTCTCCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGC 5510 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCGAGCGCGGC 117228 ||||| |||||||||||| | ||||||| || | | |||| || | | || Sbjct 5511 CTGCACACCGACTTTGCCTGCCTCCTGTTCAGCCACCTCAAGAAGCGCGCCCACCCCGAG 5570 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 || || | ||||| ||||||| || || | |||||| || |||||||||||| || Sbjct 5571 ACG-GTGGAGAAGATCATCACCGAGGCCGTGTCGATCGAGAAGGACTTCCTCACCGATGC 5629 Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 |||||| ||| ||| | || | || ||| | |||| || ||||| ||||| | Sbjct 5630 GCTGCCCGTGGCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGTTTG 5688 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407 | || ||| | || ||| | | ||||| | | ||||| |||||||| || ||||||| Sbjct 5689 TGGCGGACCGCCTCCTGGTGGCGCTGGGCAACCCCAAGTACTACAACGCGACCAACCCCT 5748 Query 117408 TGGACTTTATGAACCTCATCTCCTTGGAG 117436 | ||||| ||| | ||||||| || || Sbjct 5749 TCGACTTCATGGAGAACATCTCCCTGCAG 5777 >seq579 Length=16948 Score = 158 bits (174), Expect = 1e-33 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || |||||||| || |||||| |||| || || | || Sbjct 1795 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCC 1736 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | |||| || || | ||||| |||||||| || ||||||| Sbjct 1735 GACACGATTGAGAATG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1677 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 1676 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAA 1617 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | |||||||| || ||| |||| Sbjct 1616 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 1581 >seq1241 Length=2680 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | ||||| || |||||||| ||||| || || ||| | || ||||| || | Sbjct 2611 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2552 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| |||||||| || ||||||| Sbjct 2551 GACACGATTGAGAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 2493 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| |||||||| |||| || || || | ||||||||| Sbjct 2492 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAA 2433 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || |||||||| ||| | ||| || | || || Sbjct 2432 CATCCAGAAGGAGTCGACCCTGCATCTCGTGCTCCGCCTGCGCGGTGG 2385 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | ||||| || |||||||| ||||| || || ||| | || ||||| || | Sbjct 2383 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2324 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| ||||| || || ||||||| Sbjct 2323 GACACGATTGAGAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCA 2265 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| ||||| || || | ||||| || | ||||||||| Sbjct 2264 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAA 2205 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | ||||| || || ||| ||||| || | ||||| Sbjct 2204 CATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTGCGCGGCGG 2157 >seq824 Length=8870 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||| | || || || || ||||| || ||||| | || ||||| | | | Sbjct 7199 ATGCAAATCTTCATCAAGACTCTTACTGGCAAGACGATCACGCTGGAGGTCGAGTCGAAC 7140 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || | | ||||| ||||| ||||| |||||||| Sbjct 7139 GACACGATCGACATCGTGAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCTCCGGACCAG 7080 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||||||||| ||||| || |||| |||||||||| |||||||||| Sbjct 7079 CAGCGGTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAAC 7020 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||||| || || ||| Sbjct 7019 ATCCAGAAGGAGAGCACGCTCCACCTTGTG 6990 >seq708 Length=14709 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| ||||| ||||||||||| |||||||||| || ||||| | ||| ||||| Sbjct 8872 AAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATTTTCGCCGGCAAG 8931 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||| || | ||||| || | |||||||||||||| |||||| ||||||||| Sbjct 8932 CAGCTGGAGGATGGCCGCACGCTGAGTGACTACAACATCCAAAAGGAGAGCACGCTGCAC 8991 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 || ||| | ||| || | ||||| Sbjct 8992 CTCGTGCTCCGCCTGCGTGGCGG 9014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208631566160