Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1241 125 6e-24 seq579 122 8e-23 seq824 95.1 1e-14 seq708 93.3 4e-14 >seq1241 Length=2680 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | || ||||| ||||| || ||||| || || |||||||| |||| Sbjct 2155 TACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 2214 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| ||||| |||||| ||||| || || || |||| || |||||||| || || | Sbjct 2215 TCAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCG 2274 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || || || | || | ||||||| | ||||| Sbjct 2275 GAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGA 2334 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | ||| ||||| || || || || || || | |||||| Sbjct 2335 CCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||||||| || || || || ||||| || || Sbjct 2415 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCTTCCAGCTGCTTGCCG 2474 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || ||||| |||||||||||||| || || || Sbjct 2475 GCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 2534 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||||| | ||||||||| | ||| | ||| ||||| || || || Sbjct 2535 ACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTC 2594 Query 118722 TTTACAAAAATCTGCAT 118738 || || || | |||||| Sbjct 2595 TTGACGAACACCTGCAT 2611 >seq579 Length=16948 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || ||||| || || |||||||| ||||||| ||||| || Sbjct 1583 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTC 1642 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| |||| ||||||||||| || ||||| |||||||||||||| Sbjct 1643 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 1702 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | || | ||||| | ||| ||||||| ||| | ||| Sbjct 1703 CTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 1762 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 ||||| ||||| || || || || | ||||||| Sbjct 1763 CTTGCCCGTCAGGGTCTTGACGAACACTTGCATGG 1797 >seq824 Length=8870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||| || || |||||||| ||||| | ||||| ||||| Sbjct 6990 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 7049 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || ||| |||| | |||||||| || ||||| || |||||||||| ||| Sbjct 7050 GAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 7109 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | || || | || |||| ||||| | ||||||||| | || | ||| | Sbjct 7110 GACCTTGGACTTCACGATG-TCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCT 7168 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 |||| || ||||| || | || || |||||||| Sbjct 7169 TGCCAGTAAGAGTCTTGATGAAGATTTGCATGGC 7202 >seq708 Length=14709 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| ||||| |||||||| || |||| ||||| |||||| ||||| || || ||| | Sbjct 8979 CTCCTTTTGGATGTTGTAGTCACTCAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 8920 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||||||||||| || || || |||||||||||||| Sbjct 8919 AATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 8881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821723527572